Locus |
Common name |
Short description |
AT3G56980 |
ORG3, bHLH039 |
OBP3-RESPONSIVE GENE 3, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT3G56980.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
82, 579 |
HindIII
| A|AGCTT |
232, 360 |
KpnI
| GGTAC|C |
117 |
SacI
| GAGCT|C |
421 |
Click here to view TAIR data
>AT3G56980.1 length:777
ATGTGTGCAT TAGTACCTCC ATTGTTTCCA AACTTTGGGT GGCCATCAAC | 50 |
GGGAGAGTAC GACAGCTACT ACCTCGCCGG AGATATCCTC AACAACGGCG | 100 |
GGTTTCTTGA TTTTCCGGTA CCGGAGGAGA CTTATGGAGC TGTTACAGCG | 150 |
GTGACTCAAC ATCAGAATAG CTTTGGTGTT TCTGTTTCGT CGGAGGGAAA | 200 |
TGAAATAGAC AACAATCCGG TGGTCGTCAA GAAGCTTAAT CACAATGCTA | 250 |
GTGAGCGTGA CCGTCGCAGG AAAATTAACT CTTTGTTCTC ATCTCTCCGT | 300 |
TCATGTCTTC CTGCCTCTGG CCAATCGAAG AAGCTAAGCA TTCCTGCGAC | 350 |
GGTTTCTCGA AGCTTGAAGT ACATACCAGA GCTGCAAGAG CAAGTGAAGA | 400 |
AGCTAATAAA AAAGAAGGAA GAGCTCTTGG TGCAAATTTC AGGTCAAAGA | 450 |
AACACTGAAT GTTACGTTAA GCAGCCACCA AAGGCCGTCG CGAATTATAT | 500 |
CTCGACCGTT TCTGCGACTA GGCTTGGTGA CAACGAAGTG ATGGTCCAAA | 550 |
TCTCATCGTC CAAGATTCAT AACTTTTCGA TATCTAATGT TTTAAGTGGG | 600 |
TTAGAAGAAG ATAGGTTTGT TCTTGTGGAC ATGTCATCTT CAAGGTCTCA | 650 |
AGGAGAAAGG CTTTTCTACA CTTTGCATTT ACAAGTGGAG AAGATTGAAA | 700 |
ATTACAAGCT GAATTGCGAA GAGTTAAGTC AGAGGATGTT GTACTTGTAT | 750 |
GAGGAATGTG GAAACTCATA TATATGA | 800 |
>AT3G56980.1 longest ORF length:258
MCALVPPLFP NFGWPSTGEY DSYYLAGDIL NNGGFLDFPV PEETYGAVTA | 50 |
VTQHQNSFGV SVSSEGNEID NNPVVVKKLN HNASERDRRR KINSLFSSLR | 100 |
SCLPASGQSK KLSIPATVSR SLKYIPELQE QVKKLIKKKE ELLVQISGQR | 150 |
NTECYVKQPP KAVANYISTV SATRLGDNEV MVQISSSKIH NFSISNVLSG | 200 |
LEEDRFVLVD MSSSRSQGER LFYTLHLQVE KIENYKLNCE ELSQRMLYLY | 250 |
EECGNSYI | 300 |
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