fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G56980 ORG3, bHLH039 OBP3-RESPONSIVE GENE 3, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G56980.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 82, 579
HindIII A|AGCTT 232, 360
KpnI GGTAC|C 117
SacI GAGCT|C 421


Click here to view TAIR data

>AT3G56980.1 length:777
ATGTGTGCAT TAGTACCTCC ATTGTTTCCA AACTTTGGGT GGCCATCAAC 
50
GGGAGAGTAC GACAGCTACT ACCTCGCCGG AGATATCCTC AACAACGGCG 
100
GGTTTCTTGA TTTTCCGGTA CCGGAGGAGA CTTATGGAGC TGTTACAGCG 
150
GTGACTCAAC ATCAGAATAG CTTTGGTGTT TCTGTTTCGT CGGAGGGAAA 
200
TGAAATAGAC AACAATCCGG TGGTCGTCAA GAAGCTTAAT CACAATGCTA 
250
GTGAGCGTGA CCGTCGCAGG AAAATTAACT CTTTGTTCTC ATCTCTCCGT 
300
TCATGTCTTC CTGCCTCTGG CCAATCGAAG AAGCTAAGCA TTCCTGCGAC 
350
GGTTTCTCGA AGCTTGAAGT ACATACCAGA GCTGCAAGAG CAAGTGAAGA 
400
AGCTAATAAA AAAGAAGGAA GAGCTCTTGG TGCAAATTTC AGGTCAAAGA 
450
AACACTGAAT GTTACGTTAA GCAGCCACCA AAGGCCGTCG CGAATTATAT 
500
CTCGACCGTT TCTGCGACTA GGCTTGGTGA CAACGAAGTG ATGGTCCAAA 
550
TCTCATCGTC CAAGATTCAT AACTTTTCGA TATCTAATGT TTTAAGTGGG 
600
TTAGAAGAAG ATAGGTTTGT TCTTGTGGAC ATGTCATCTT CAAGGTCTCA 
650
AGGAGAAAGG CTTTTCTACA CTTTGCATTT ACAAGTGGAG AAGATTGAAA 
700
ATTACAAGCT GAATTGCGAA GAGTTAAGTC AGAGGATGTT GTACTTGTAT 
750
GAGGAATGTG GAAACTCATA TATATGA
800

>AT3G56980.1 longest ORF length:258
MCALVPPLFP NFGWPSTGEY DSYYLAGDIL NNGGFLDFPV PEETYGAVTA 
50
VTQHQNSFGV SVSSEGNEID NNPVVVKKLN HNASERDRRR KINSLFSSLR 
100
SCLPASGQSK KLSIPATVSR SLKYIPELQE QVKKLIKKKE ELLVQISGQR 
150
NTECYVKQPP KAVANYISTV SATRLGDNEV MVQISSSKIH NFSISNVLSG 
200
LEEDRFVLVD MSSSRSQGER LFYTLHLQVE KIENYKLNCE ELSQRMLYLY 
250
EECGNSYI
300