fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G57480 zinc finger (C2H2 type, AN1-like) family protein (.1)

>AT3G57480.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 21


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>AT3G57480.1 length:750
ATGGGAACTC CAGAATTTCC AGATCTGGGT AAACACTGCT CCGTCGATTA 
50
TTGCAAACAG ATCGATTTCT TGCCCTTCAC ATGCGATCGC TGCCTTCAGG 
100
TGTATTGTCT GGATCATCGT AGCTATATGA AACACGATTG TCCAAAAGGA 
150
AACAGAGGAG ATGTCACTGT GGTTATTTGT CCATTATGTG CTAAAGGAGT 
200
TAGATTAAAC CCTGACGAAG ATCCCAACAT CACCTGGGAG AAACATGTTA 
250
ATACAGACTG TGATCCATCT AACTACGAAA AAGCTGTCAA GAAGAAGAAA 
300
TGTCCTGTTC CTAGATGCAG AGAACTCTTG ACATTCTCCA ATACTATTAA 
350
ATGTCGAGAT TGTAGCATCG ATCATTGTTT GAAACATCGG TTTGGACCTG 
400
ATCATAGTTG TTCTGGACCC AAGAAGCCTG AATCGAGTTT CTCATTCATG 
450
GGTTTCTTGA GTACAAACAC AAAAGAAGCT CCTGCATCAT CATCATCTTC 
500
TTCGAGATGG TCTAGTCTTT TCGCTTCTGC GGAAGCAAGT ATTAGTAGAC 
550
TCGGTAACGA TATAAGCCAG AAGTTACAGT TTGCGAGTGG CAATGATGGC 
600
AATTCAGAGA AAACGCAAGA GAGGAATGGA AAACAGAATT GTGGCAAAGT 
650
TACGGTTGAT GTTTGTCCCA AATGTAGTAG AGGGTTTCGT GATCCGGTGG 
700
ATCTATTGAA GCATATCGAT AAGGATCATC GTGGCACTTC TAAAGCCTAG 
750

>AT3G57480.1 longest ORF length:249
MGTPEFPDLG KHCSVDYCKQ IDFLPFTCDR CLQVYCLDHR SYMKHDCPKG 
50
NRGDVTVVIC PLCAKGVRLN PDEDPNITWE KHVNTDCDPS NYEKAVKKKK 
100
CPVPRCRELL TFSNTIKCRD CSIDHCLKHR FGPDHSCSGP KKPESSFSFM 
150
GFLSTNTKEA PASSSSSSRW SSLFASAEAS ISRLGNDISQ KLQFASGNDG 
200
NSEKTQERNG KQNCGKVTVD VCPKCSRGFR DPVDLLKHID KDHRGTSKA
250