Locus |
Common name |
Short description |
AT3G57600 |
DREB2F |
Integrase-type DNA-binding superfamily protein (.1) |
>AT3G57600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
822 |
KpnI
| GGTAC|C |
306 |
NcoI
| C|CATGG |
646 |
PvuII
| CAG|CTG |
176, 696 |
StyI
| C|C[AT][AT]GG |
646 |
Click here to view TAIR data
>AT3G57600.1 length:834
ATGGAGAAAT CATCCTCAAT GAAACAATGG AAGAAGGGTC CTGCTCGGGG | 50 |
TAAAGGCGGT CCACAAAACG CTCTTTGTCA GTACCGTGGA GTCAGGCAAA | 100 |
GGACTTGGGG CAAATGGGTG GCTGAGATCA GAGAGCCCAA GAAGAGGGCA | 150 |
AGACTTTGGC TTGGCTCTTT CGCTACAGCT GAAGAAGCAG CTATGGCTTA | 200 |
TGATGAGGCT GCCTTGAAAC TCTATGGGCA CGACGCATAC CTCAACTTAC | 250 |
CTCATCTTCA GCGGAATACA AGACCTTCTC TGAGTAACTC TCAGAGGTTC | 300 |
AAATGGGTAC CTTCAAGGAA GTTTATATCT ATGTTTCCTT CATGTGGTAT | 350 |
GCTAAACGTG AATGCTCAGC CTAGTGTTCA CATAATCCAG CAAAGACTAG | 400 |
AAGAACTCAA GAAAACTGGA CTTTTATCTC AATCCTATTC TTCTAGTTCT | 450 |
TCCTCCACCG AATCAAAAAC TAATACTAGC TTTCTTGATG AGAAGACCAG | 500 |
CAAGGGAGAA ACAGACAATA TGTTCGAAGG TGGTGATCAG AAGAAACCAG | 550 |
AGATCGACCT GACCGAGTTT CTTCAGCAAC TAGGAATCTT GAAGGATGAA | 600 |
AATGAAGCAG AACCAAGTGA GGTAGCAGAG TGTCATTCCC CTCCACCATG | 650 |
GAACGAGCAA GAAGAAACTG GAAGTCCTTT CAGAACTGAG AATTTCAGCT | 700 |
GGGATACCCT GATCGAGATG CCAAGAAGTG AAACCACAAC TATGCAATTT | 750 |
GACTCCAGCA ACTTCGGAAG CTATGATTTT GAGGATGATG TATCCTTCCC | 800 |
TTCCATCTGG GACTACTACG GAAGCTTAGA TTGA | 850 |
>AT3G57600.1 longest ORF length:277
MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA | 50 |
RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF | 100 |
KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS | 150 |
SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE | 200 |
NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF | 250 |
DSSNFGSYDF EDDVSFPSIW DYYGSLD | 300 |
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