fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G57600 DREB2F Integrase-type DNA-binding superfamily protein (.1)

>AT3G57600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 822
KpnI GGTAC|C 306
NcoI C|CATGG 646
PvuII CAG|CTG 176, 696
StyI C|C[AT][AT]GG 646


Click here to view TAIR data

>AT3G57600.1 length:834
ATGGAGAAAT CATCCTCAAT GAAACAATGG AAGAAGGGTC CTGCTCGGGG 
50
TAAAGGCGGT CCACAAAACG CTCTTTGTCA GTACCGTGGA GTCAGGCAAA 
100
GGACTTGGGG CAAATGGGTG GCTGAGATCA GAGAGCCCAA GAAGAGGGCA 
150
AGACTTTGGC TTGGCTCTTT CGCTACAGCT GAAGAAGCAG CTATGGCTTA 
200
TGATGAGGCT GCCTTGAAAC TCTATGGGCA CGACGCATAC CTCAACTTAC 
250
CTCATCTTCA GCGGAATACA AGACCTTCTC TGAGTAACTC TCAGAGGTTC 
300
AAATGGGTAC CTTCAAGGAA GTTTATATCT ATGTTTCCTT CATGTGGTAT 
350
GCTAAACGTG AATGCTCAGC CTAGTGTTCA CATAATCCAG CAAAGACTAG 
400
AAGAACTCAA GAAAACTGGA CTTTTATCTC AATCCTATTC TTCTAGTTCT 
450
TCCTCCACCG AATCAAAAAC TAATACTAGC TTTCTTGATG AGAAGACCAG 
500
CAAGGGAGAA ACAGACAATA TGTTCGAAGG TGGTGATCAG AAGAAACCAG 
550
AGATCGACCT GACCGAGTTT CTTCAGCAAC TAGGAATCTT GAAGGATGAA 
600
AATGAAGCAG AACCAAGTGA GGTAGCAGAG TGTCATTCCC CTCCACCATG 
650
GAACGAGCAA GAAGAAACTG GAAGTCCTTT CAGAACTGAG AATTTCAGCT 
700
GGGATACCCT GATCGAGATG CCAAGAAGTG AAACCACAAC TATGCAATTT 
750
GACTCCAGCA ACTTCGGAAG CTATGATTTT GAGGATGATG TATCCTTCCC 
800
TTCCATCTGG GACTACTACG GAAGCTTAGA TTGA
850

>AT3G57600.1 longest ORF length:277
MEKSSSMKQW KKGPARGKGG PQNALCQYRG VRQRTWGKWV AEIREPKKRA 
50
RLWLGSFATA EEAAMAYDEA ALKLYGHDAY LNLPHLQRNT RPSLSNSQRF 
100
KWVPSRKFIS MFPSCGMLNV NAQPSVHIIQ QRLEELKKTG LLSQSYSSSS 
150
SSTESKTNTS FLDEKTSKGE TDNMFEGGDQ KKPEIDLTEF LQQLGILKDE 
200
NEAEPSEVAE CHSPPPWNEQ EETGSPFRTE NFSWDTLIEM PRSETTTMQF 
250
DSSNFGSYDF EDDVSFPSIW DYYGSLD
300