fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G57800 bHLH060 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G57800.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 733
NdeI CA|TATG 599
SacI GAGCT|C 381, 614
SpeI A|CTAGT 102


Click here to view TAIR data

>AT3G57800.2 length:1140
ATGGATCTGA CTGGAGGATT TGGAGCTAGA TCCGGCGGTG TTGGACCGTG 
50
CCGGGAACCA ATAGGCCTTG AATCGCTACA TCTCGGTGAC GAATTTCGGC 
100
AACTAGTGAC GACTTTACCT CCCGAGAACC CCGGCGGTTC GTTCACGGCT 
150
TTGCTTGAGC TTCCACCTAC ACAAGCAGTG GAGCTTCTCC ATTTCACTGA 
200
TTCTTCGTCT TCTCAACAAG CGGCAGTGAC AGGGATCGGT GGAGAGATTC 
250
CTCCGCCGCT TCACTCTTTC GGTGGGACAT TGGCTTTTCC TTCTAACTCA 
300
GTTCTCATGG AGCGAGCAGC TCGTTTCTCG GTGATTGCCA CTGAGCAACA 
350
AAACGGAAAT ATCTCCGGGG AGACTCCGAC GAGCTCTGTA CCTTCCAATT 
400
CAAGTGCTAA TCTCGACAGA GTCAAGACGG AGCCTGCTGA GACCGATTCA 
450
TCTCAGCGGT TGATTTCTGA TTCAGCGATT GAGAATCAAA TCCCTTGCCC 
500
TAACCAGAAC AATCGAAATG GGAAGAGGAA AGATTTCGAA AAGAAGGGTA 
550
AAAGCTCGAC GAAGAAGAAC AAAAGCTCTG AAGAGAACGA GAAGCTGCCA 
600
TATGTTCACG TTAGAGCTCG TCGTGGTCAA GCAACCGATA GCCATAGCTT 
650
AGCAGAACGA GCAAGAAGAG AGAAGATAAA TGCACGAATG AAGCTGTTAC 
700
AGGAACTGGT CCCAGGCTGT GATAAGATTC AAGGTACCGC GCTGGTGCTG 
750
GATGAAATCA TTAACCATGT CCAGTCATTA CAACGTCAAG TGGAGATGCT 
800
ATCAATGAGA CTTGCTGCGG TAAACCCCAG AATCGACTTC AATCTCGACA 
850
CCATATTGGC TTCAGAAAAC GGTTCTTTAA TGGATGGGAG CTTCAATGCC 
900
GCACCAATGC AGCTTGCTTG GCCTCAGCAA GCCATTGAGA CCGAACAGTC 
950
CTTTCATCAC CGGCAACTGC AACAACCACC AACACAACAA TGGCCTTTTG 
1000
ACGGCTTGAA CCAGCCGGTA TGGGGAAGAG AAGAGGATCA AGCTCATGGC 
1050
AATGATAACA GCAATTTGAT GGCAGTTTCT GAAAATGTAA TGGTGGCTTC 
1100
TGCTAATTTG CACCCAAATC AGGTCAAAAT GGAGCTGTAA 
1150

>AT3G57800.2 longest ORF length:379
MDLTGGFGAR SGGVGPCREP IGLESLHLGD EFRQLVTTLP PENPGGSFTA 
50
LLELPPTQAV ELLHFTDSSS SQQAAVTGIG GEIPPPLHSF GGTLAFPSNS 
100
VLMERAARFS VIATEQQNGN ISGETPTSSV PSNSSANLDR VKTEPAETDS 
150
SQRLISDSAI ENQIPCPNQN NRNGKRKDFE KKGKSSTKKN KSSEENEKLP 
200
YVHVRARRGQ ATDSHSLAER ARREKINARM KLLQELVPGC DKIQGTALVL 
250
DEIINHVQSL QRQVEMLSMR LAAVNPRIDF NLDTILASEN GSLMDGSFNA 
300
APMQLAWPQQ AIETEQSFHH RQLQQPPTQQ WPFDGLNQPV WGREEDQAHG 
350
NDNSNLMAVS ENVMVASANL HPNQVKMEL
400