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| Locus | Common name | Short description |
| AT3G57920 | SPL15, MSC1 | squamosa promoter binding protein-like 15 (.1) |
>AT3G57920.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvrII, BaeI, BalI, BanII, BbsI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspHI, BspMI, BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tsp45I, Tth111I, XbaI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 159 |
| AccII(FnuDII) | CG|CG | 865 |
| AccIII(BspMII) | T|CCGGA | 115 |
| AciI | C|CGC | 513, 794, 815 |
| AflIII | A|CPuPyGT | 619 |
| AluI | AG|CT | 214, 321, 602, 608, 656, 966, 1021 |
| AlwNI | CAGNNN|CTG | 988 |
| AseI | AT|TAAT | 553 |
| AvaI | C|PyCGPuG | 225, 1009 |
| AvaII | G|G[AT]CC | 540 |
| BamHI | G|GATCC | 112, 118 |
| BanI | G|GPyPuCC | 173, 946 |
| BbvCI | CC|TCAGC | 844 |
| BglII | A|GATCT | 95 |
| BlpI | GC|TNAGC | 788 |
| BsaBI | GATNN|NNATC | 117 |
| BsaJI | C|CNNGG | 164, 544 |
| BsaWI | [AT]|CCGG[AT] | 115 |
| BsiHKAI | G[AT]GC[AT]|C | 662 |
| BslI | CCNNNNN|NNGG | 169, 741, 854 |
| BsoBI | C|PyCGPuG | 225, 1009 |
| Bsp1286I | G[GAT]GC[CAT]|C | 662 |
| BspEI | T|CCGGA | 115 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 173, 946 |
| BsrDI | GCAATGNN| | 208, 474, 943 |
| BssKI | |CCNGG | 134, 537 |
| BstF5I | GGATGNN| | 109 |
| BstNI | CC|[AT]GG | 537 |
| BstUI | CG|CG | 865 |
| BstYI | Pu|GATCPy | 95, 112, 118, 198, 495 |
| BtgI | C|CPuPyGG | 164, 544 |
| Cac8I | GCN|NGC | 868, 921 |
| DdeI | C|TNAG | 66, 78, 201, 328, 787, 843 |
| DpnI | GA-CH3|TC | 94, 111, 117, 197, 494, 519, 757 |
| DpnII | |GATC | 94, 111, 117, 197, 494, 519, 757 |
| DraIII | CACNNN|GTG | 68 |
| DrdI | GACNNNN|NNGTC | 371 |
| Fnu4HI | GC|NGC | 468, 530, 701, 815 |
| HaeIII | GG|CC | 25, 534 |
| HincII | GTPy|PuAC | 299, 510 |
| HindIII | A|AGCTT | 215, 609 |
| HinfI | G|ANTC | 30, 54, 76, 364, 436, 651, 750, 905, 1029 |
| HpaII | C|CGG | 114, 133 |
| Hpy188I | TCN|GA | 89, 327, 710, 768, 915, 989 |
| Hpy99I | CG[AT]CG| | 384 |
| HpyCH4III | ACN|GT | 144, 542 |
| HpyCH4V | TG|CA | 242, 469, 528 |
| MboI | |GATC | 94, 111, 117, 197, 494, 519, 757 |
| MfeI | C|AATTG | 1050 |
| MseI | T|TAA | 8, 210, 477, 552 |
| MslI | CAPyNN|NNPuTG | 584, 952 |
| MspA1I | C[AC]G|C[GT]G | 532 |
| MspI | C|CGG | 114, 133 |
| MwoI | GCNNNNN|NNGC | 877 |
| N.BstNBI | GAGTCNNNN|N | 35, 59, 910 |
| NciI | CC|[CG]GG | 134 |
| NlaIII | CATG| | 580, 596, 618, 726, 1000 |
| NlaIV | GGN|NCC | 112, 118, 173, 918, 946, 1005 |
| NspI | PuCATG|Py | 619 |
| PaeR7I | C|TCGAG | 225 |
| PciI | A|CATGT | 619 |
| PflMI | CCANNNN|NTGG | 741 |
| PspGI | |CC[AT]GG | 537 |
| RsaI | GT|AC | 838 |
| Sau3AI | |GATC | 94, 111, 117, 197, 494, 519, 757 |
| Sau96I | G|GNCC | 540 |
| ScrFI | CC|NGG | 134, 537 |
| SmlI | C|TPyPuAG | 225, 606 |
| Taqƒ¿I | T|CGA | 102, 224, 433, 747, 752 |
| TfiI | G|A[AT]TC | 436, 651 |
| TliI | C|TCGAG | 225 |
| TseI | G|C[AT]GC | 468, 530, 701 |
| Tsp509I | |AATT | 691, 881, 1049 |
| TspRI | NNCA[CG]TGNN| | 70, 525 |
| XcmI | CCANNNNN|NNNNTGG | 727, 942 |
| XhoI | C|TCGAG | 225 |
Click here to view TAIR data
>AT3G57920.1 length:1065
ATGGAGTTGT TAATGTGTTC GGGTCAGGCC GAGTCAGGTG GTTCTTCTTC | 50 |
CACCGAGTCT TCTTCACTCA GTGGTGGACT CAGGTTTGGT CAGAAGATCT | 100 |
ACTTCGAGGA TGGATCCGGA TCCAGAAGCA AGAACCGGGT CAATACCGTT | 150 |
CGTAAGTCGT CTACCACGGC GAGGTGCCAA GTGGAAGGTT GTAGAATGGA | 200 |
TCTAAGCAAT GTTAAAGCTT ATTACTCGAG ACACAAAGTT TGTTGCATTC | 250 |
ACTCTAAATC ATCTAAAGTC ATTGTCTCTG GTCTTCATCA AAGGTTTTGT | 300 |
CAACAATGTA GCAGGTTTCA CCAGCTTTCT GAGTTTGACT TGGAGAAAAG | 350 |
AAGTTGTCGC AGAAGACTCG CTTGTCATAA CGAACGACGA AGAAAACCAC | 400 |
AACCCACAAC GGCTCTTTTC ACTTCTCATT ACTCTCGAAT CGCTCCATCT | 450 |
CTTTACGGAA ACCCCAATGC TGCAATGATT AAAAGCGTTT TGGGAGATCC | 500 |
TACTGCGTGG TCAACCGCAA GATCAGTGAT GCAGCGGCCT GGACCGTGGC | 550 |
AGATTAATCC AGTTAGGGAA ACCCATCCAC ACATGAATGT TTTATCACAT | 600 |
GGAAGCTCAA GCTTTACTAC ATGTCCAGAG ATGATAAACA ACAATAGCAC | 650 |
AGATTCAAGC TGTGCTCTCT CTCTTCTGTC AAACTCATAC CCAATTCATC | 700 |
AGCAGCAACT TCAGACACCA ACAAATACAT GGCGACCATC TTCTGGTTTC | 750 |
GACTCGATGA TCTCATTCTC CGATAAGGTT ACAATGGCTC AGCCACCGCC | 800 |
CATTTCAACC CATCAGCCGC CCATCTCAAC ACATCAGCAG TACCTCAGCC | 850 |
AAACTTGGGA AGTCATCGCG GGCGAAAAGA GCAATTCACA TTATATGTCT | 900 |
CCTGTGAGTC AAATCTCGGA GCCAGCAGAT TTCCAGATAA GCAATGGCAC | 950 |
CACAATGGGT GGATTTGAGC TGTATCTTCA TCAGCAGGTT CTGAAGCAAT | 1000 |
ACATGGAACC CGAGAACACA AGAGCTTATG ACTCCTCTCC TCAACATTTC | 1050 |
AATTGGTCTC TTTGA | 1100 |
>AT3G57920.1 longest ORF length:354
MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV | 50 |
RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC | 100 |
QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS | 150 |
LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH | 200 |
GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF | 250 |
DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS | 300 |
PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF | 350 |
NWSL | 400 |