|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G57920 | SPL15, MSC1 | squamosa promoter binding protein-like 15 (.1) |
>AT3G57920.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 112, 118 |
| BglII | A|GATCT | 95 |
| HindIII | A|AGCTT | 215, 609 |
| XhoI | C|TCGAG | 225 |
Click here to view TAIR data
>AT3G57920.1 length:1065
ATGGAGTTGT TAATGTGTTC GGGTCAGGCC GAGTCAGGTG GTTCTTCTTC | 50 |
CACCGAGTCT TCTTCACTCA GTGGTGGACT CAGGTTTGGT CAGAAGATCT | 100 |
ACTTCGAGGA TGGATCCGGA TCCAGAAGCA AGAACCGGGT CAATACCGTT | 150 |
CGTAAGTCGT CTACCACGGC GAGGTGCCAA GTGGAAGGTT GTAGAATGGA | 200 |
TCTAAGCAAT GTTAAAGCTT ATTACTCGAG ACACAAAGTT TGTTGCATTC | 250 |
ACTCTAAATC ATCTAAAGTC ATTGTCTCTG GTCTTCATCA AAGGTTTTGT | 300 |
CAACAATGTA GCAGGTTTCA CCAGCTTTCT GAGTTTGACT TGGAGAAAAG | 350 |
AAGTTGTCGC AGAAGACTCG CTTGTCATAA CGAACGACGA AGAAAACCAC | 400 |
AACCCACAAC GGCTCTTTTC ACTTCTCATT ACTCTCGAAT CGCTCCATCT | 450 |
CTTTACGGAA ACCCCAATGC TGCAATGATT AAAAGCGTTT TGGGAGATCC | 500 |
TACTGCGTGG TCAACCGCAA GATCAGTGAT GCAGCGGCCT GGACCGTGGC | 550 |
AGATTAATCC AGTTAGGGAA ACCCATCCAC ACATGAATGT TTTATCACAT | 600 |
GGAAGCTCAA GCTTTACTAC ATGTCCAGAG ATGATAAACA ACAATAGCAC | 650 |
AGATTCAAGC TGTGCTCTCT CTCTTCTGTC AAACTCATAC CCAATTCATC | 700 |
AGCAGCAACT TCAGACACCA ACAAATACAT GGCGACCATC TTCTGGTTTC | 750 |
GACTCGATGA TCTCATTCTC CGATAAGGTT ACAATGGCTC AGCCACCGCC | 800 |
CATTTCAACC CATCAGCCGC CCATCTCAAC ACATCAGCAG TACCTCAGCC | 850 |
AAACTTGGGA AGTCATCGCG GGCGAAAAGA GCAATTCACA TTATATGTCT | 900 |
CCTGTGAGTC AAATCTCGGA GCCAGCAGAT TTCCAGATAA GCAATGGCAC | 950 |
CACAATGGGT GGATTTGAGC TGTATCTTCA TCAGCAGGTT CTGAAGCAAT | 1000 |
ACATGGAACC CGAGAACACA AGAGCTTATG ACTCCTCTCC TCAACATTTC | 1050 |
AATTGGTCTC TTTGA | 1100 |
>AT3G57920.1 longest ORF length:354
MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV | 50 |
RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC | 100 |
QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS | 150 |
LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH | 200 |
GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF | 250 |
DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS | 300 |
PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF | 350 |
NWSL | 400 |