Locus |
Common name |
Short description |
AT3G58070 |
GIS |
GLABROUS INFLORESCENCE STEMS, C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT3G58070.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
444 |
SpeI
| A|CTAGT |
589 |
StyI
| C|C[AT][AT]GG |
315 |
Click here to view TAIR data
>AT3G58070.1 length:762
ATGGACGAGG CTACCGGAGA AACAGAAACT CAAGATTTCA TGAACGTCGA | 50 |
ATCCTTCTCT CAGCTTCCTT TCATTCGCCG TCCTAAAGAT AAGAACCCTA | 100 |
AACCCATTCG TGTCTTCGGA AAAGATTTCA CCGGCAGAGA TTTCTCTATT | 150 |
ACTACCGGTC AAGAAGACTA CACCGATCCT TACCAGACCA AAAACAAAGA | 200 |
AGAAGAAGAG GAAGAAGACC AAACCGGAGA CAACAGTACG GACAATAATA | 250 |
GCATCAGCCA CAACAGGAGA TTCGAGTGTC ACTATTGCTT TAGAAATTTT | 300 |
CCTACTTCAC AAGCCCTAGG TGGACACCAA AACGCTCACA AACGCGAACG | 350 |
TCAGCTTGCC AAACGCGGTG TTTCCTCTTA CTTTTATCAT CCTGACAATA | 400 |
ACCCTTACAG TTACCGTCAT TACCCGTCGT GGACCAATGG TCCGTTAACC | 450 |
GCGGCTAGGT CCTATGGAGG ATTTTCTTCT GGTCCTAAGC CGTCGGGGTA | 500 |
TTATACACGA CCCAGCTATG GGAGTCAGTT AGGACTATGG CGTCTACCGC | 550 |
CTCGCGTTCA AGGCGTTTAT AACTCAAACG CAGCGTTTAC TAGTAATGGC | 600 |
TCTTCTTCTT CTTCTAATTC GACTTTACCG TTGTTGACCC GTTCTCAAAC | 650 |
TCAACTATCA TCGCAAGTGG GTGGCTCCGC TGCTCAGAAC AGAATGTCAT | 700 |
CGTACGGTTA CGGATTGAGC CCTAACGTGC AAGATCATGT GAGTCTCGAT | 750 |
CTTCATCTTT AA | 800 |
>AT3G58070.1 longest ORF length:253
MDEATGETET QDFMNVESFS QLPFIRRPKD KNPKPIRVFG KDFTGRDFSI | 50 |
TTGQEDYTDP YQTKNKEEEE EEDQTGDNST DNNSISHNRR FECHYCFRNF | 100 |
PTSQALGGHQ NAHKRERQLA KRGVSSYFYH PDNNPYSYRH YPSWTNGPLT | 150 |
AARSYGGFSS GPKPSGYYTR PSYGSQLGLW RLPPRVQGVY NSNAAFTSNG | 200 |
SSSSSNSTLP LLTRSQTQLS SQVGGSAAQN RMSSYGYGLS PNVQDHVSLD | 250 |
LHL | 300 |
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