fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G58120 ATBZIP61 Basic-leucine zipper (bZIP) transcription factor family protein (.1)

>AT3G58120.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 946
SalI G|TCGAC 778


Click here to view TAIR data

>AT3G58120.1 length:990
ATGGCACAAC TTCCTCCGAA AATCCCAACC ATGACGACGC CAAATTGGCC 
50
TGACTTCTCC TCCCAGAAAC TCCCTTCCAT AGCCGCAACG GCGGCAGCCG 
100
CAGCAACCGC TGGACCTCAA CAACAAAACC CTTCATGGAT GGATGAGTTT 
150
CTCGACTTCT CAGCGACTCG CCGTGGGACT CACCGTCGTT CTATAAGCGA 
200
CTCCATTGCT TTCCTTGAAC CACCTTCCTC CGGCGTCGGA AACCACCACT 
250
TCGATAGGTT TGACGACGAG CAATTCATGT CCATGTTCAA CGACGACGTA 
300
CACAACAATA ACCACAATCA TCATCATCAT CACAGCATCA ACGGCAATGT 
350
GGGTCCCACG CGTTCATCCT CCAACACCTC CACGCCGTCC GATCATAATA 
400
GCCTTAGCGA CGACGACAAC AACAAAGAAG CACCACCGTC CGATCATGAT 
450
CATCACATGG ACAATAATGT AGCCAATCAA AACAACGCCG CCGGTAACAA 
500
TTACAACGAA TCAGACGAGG TCCAAAGCCA GTGCAAGACG GAGCCACAAG 
550
ATGGTCCGTC GGCGAATCAA AACTCCGGTG GAAGCTCCGG TAATCGTATT 
600
CACGACCCTA AAAGGGTAAA AAGAATTTTA GCAAATAGGC AATCAGCACA 
650
GAGATCAAGG GTGAGGAAAT TGCAATACAT ATCAGAGCTT GAAAGGAGCG 
700
TTACTTCATT GCAGACTGAA GTGTCAGTGT TATCGCCAAG AGTTGCGTTT 
750
TTGGATCATC AGCGATTGCT TCTCAACGTC GACAATAGTG CTATCAAGCA 
800
ACGAATCGCA GCTTTAGCAC AAGATAAGAT TTTCAAAGAC GCTCATCAAG 
850
AAGCATTGAA GAGAGAAATA GAGAGACTTC GACAAGTATA TCATCAACAA 
900
AGCCTCAAGA AGATGGAGAA TAATGTCTCC GATCAATCTC CGGCCGATAT 
950
CAAACCGTCC GTTGAGAAGG AACAGCTCCT CAATGTCTAA 
1000

>AT3G58120.1 longest ORF length:329
MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF 
50
LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV 
100
HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD 
150
HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI 
200
HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF 
250
LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ 
300
SLKKMENNVS DQSPADIKPS VEKEQLLNV
350