fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G60460 DUO1 DUO POLLEN 1, myb-like HTH transcriptional regulator family protein (.1)

>AT3G60460.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 34
PvuII CAG|CTG 728, 851
SacI GAGCT|C 99
StyI C|C[AT][AT]GG 34


Click here to view TAIR data

>AT3G60460.1 length:894
ATGGAAGCGA AGAAGGAAGA GATAAAGAAA GGTCCATGGA AAGCCGAAGA 
50
AGACGAAGTA CTCATCAACC ATGTCAAGAG ATACGGTCCT CGTGATTGGA 
100
GCTCCATTCG ATCCAAAGGT CTTCTTCAAC GCACCGGCAA ATCCTGTCGT 
150
CTTCGTTGGG TCAATAAACT CCGTCCCAAT CTCAAAAATG GATGCAAGTT 
200
CTCGGCTGAC GAAGAGAGGA CTGTGATTGA GTTACAATCT GAGTTTGGTA 
250
ACAAATGGGC GAGAATCGCT ACGTATCTAC CGGGAAGAAC TGATAACGAT 
300
GTGAAGAATT TCTGGAGTAG CAGACAAAAG AGACTCGCTA GGATTCTTCA 
350
TAACTCCTCT GATGCATCGA GTTCGAGTTT CAATCCCAAA TCTTCTTCTT 
400
CTCATCGACT CAAGGGCAAA AACGTCAAAC CAATCCGTCA ATCCTCTCAG 
450
GGTTTTGGTT TGGTTGAGGA AGAGGTTACA GTTTCTTCTT CATGTTCCCA 
500
GATGGTTCCT TATTCATCTG ATCAAGTTGG TGATGAAGTC TTGAGGTTGC 
550
CGGATTTGGG TGTTAAGTTA GAGCATCAGC CTTTCGCTTT TGGCACTGAT 
600
CTTGTCCTAG CAGAGTACTC TGACTCACAG AATGATGCAA ATCAGCAAGC 
650
AATCAGCCCT TTCTCTCCAG AAAGCAGAGA GCTTTTGGCT AGACTTGACG 
700
ACCCTTTTTA CTATGATATA CTTGGACCAG CTGATTCTTC TGAGCCATTG 
750
TTCGCTCTCC CTCAGCCGTT CTTCGAGCCT TCGCCTGTGC CGAGAAGATG 
800
CAGACATGTT TCAAAGGATG AAGAAGCTGA TGTTTTCTTA GACGATTTCC 
850
CAGCTGACAT GTTTGATCAG GTTGATCCAA TCCCAAGTCC TTAG
900

>AT3G60460.1 longest ORF length:297
MEAKKEEIKK GPWKAEEDEV LINHVKRYGP RDWSSIRSKG LLQRTGKSCR 
50
LRWVNKLRPN LKNGCKFSAD EERTVIELQS EFGNKWARIA TYLPGRTDND 
100
VKNFWSSRQK RLARILHNSS DASSSSFNPK SSSSHRLKGK NVKPIRQSSQ 
150
GFGLVEEEVT VSSSCSQMVP YSSDQVGDEV LRLPDLGVKL EHQPFAFGTD 
200
LVLAEYSDSQ NDANQQAISP FSPESRELLA RLDDPFYYDI LGPADSSEPL 
250
FALPQPFFEP SPVPRRCRHV SKDEEADVFL DDFPADMFDQ VDPIPSP
300