fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G60490 Integrase-type DNA-binding superfamily protein (.1)

>AT3G60490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 75
PstI CTGCA|G 437


Click here to view TAIR data

>AT3G60490.1 length:771
ATGGGAAAAC AAATCAACAT AGAGAGTAGT GCTACTCATC ATCAAGACAA 
50
TATTGTTTCC GTTATAACAG CCACGATATC CTCCTCCTCC GTCGTAACGT 
100
CTTCGTCAGA CTCTTGGTCT ACCTCCAAAA GATCGTTAGT GCAAGACAAT 
150
GACTCCGGAG GGAAACGGCG GAAGAGCAAC GTTAGTGATG ATAACAAGAA 
200
TCCGACGTCG TATAGAGGAG TGAGGATGAG GAGTTGGGGA AAATGGGTGT 
250
CGGAGATTAG AGAGCCGAGG AAGAAATCAA GAATATGGCT TGGCACTTAT 
300
CCAACGGCAG AGATGGCAGC TCGTGCTCAT GATGTGGCGG CTTTAGCTAT 
350
TAAAGGCAAC TCCGGTTTTC TTAATTTCCC TGAATTATCC GGTTTGCTTC 
400
CTCGTCCGGT TAGCTGCTCT CCTAAGGATA TACAAGCTGC AGCTACCAAA 
450
GCCGCCGAAG CAACCACGTG GCACAAACCG GTTATCGATA AGAAATTAGC 
500
TGATGAGCTA AGCCACTCTG AGTTGTTGTC TACCGCTCAG TCTTCGACTT 
550
CTAGTAGTTT CGTGTTTTCT TCGGACACGT CGGAGACTTC TAGTACGGAC 
600
AAGGAAAGCA ACGAAGAGAC GGTGTTTGAT TTGCCGGACC TTTTCACGGA 
650
CGGGCTTATG AACCCAAACG ATGCGTTTTG TTTATGCAAC GGCACCTTTA 
700
CGTGGCAGCT TTACGGAGAG GAGGATGTAG GGTTCAGGTT TGAAGAGCCG 
750
TTTAATTGGC AAAATGACTA A
800

>AT3G60490.1 longest ORF length:256
MGKQINIESS ATHHQDNIVS VITATISSSS VVTSSSDSWS TSKRSLVQDN 
50
DSGGKRRKSN VSDDNKNPTS YRGVRMRSWG KWVSEIREPR KKSRIWLGTY 
100
PTAEMAARAH DVAALAIKGN SGFLNFPELS GLLPRPVSCS PKDIQAAATK 
150
AAEATTWHKP VIDKKLADEL SHSELLSTAQ SSTSSSFVFS SDTSETSSTD 
200
KESNEETVFD LPDLFTDGLM NPNDAFCLCN GTFTWQLYGE EDVGFRFEEP 
250
FNWQND
300