fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G60530 GATA4 GATA transcription factor 4 (.1)

>AT3G60530.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 698
SacI GAGCT|C 658


Click here to view TAIR data

>AT3G60530.1 length:723
ATGGACGTCT ACGGCATGTC TTCACCGGAC TTGCTTCGTA TCGACGACCT 
50
TCTCGATTTC TCCAACGACG AAATCTTCTC TTCCTCTTCC ACCGTCACTT 
100
CCTCCGCCGC TTCCTCCGCC GCTTCTTCCG AAAACCCTTT CAGCTTTCCT 
150
TCTTCCACCT ACACTTCTCC TACTCTCCTC ACCGACTTCA CTCACGATCT 
200
CTGCGTTCCC AGTGACGACG CAGCTCATCT CGAATGGTTA TCGCGATTCG 
250
TTGACGATTC ATTCTCCGAT TTCCCAGCAA ATCCTTTAAC CATGACCGTT 
300
AGACCCGAGA TTTCATTCAC CGGAAAACCT AGAAGTCGCC GATCAAGAGC 
350
ACCAGCACCT TCCGTAGCTG GAACTTGGGC TCCGATGTCT GAATCAGAGC 
400
TTTGTCACTC CGTCGCTAAA CCTAAACCGA AGAAAGTCTA CAACGCTGAA 
450
TCGGTTACGG CGGATGGAGC GAGGCGGTGC ACGCACTGTG CCTCGGAGAA 
500
AACGCCACAG TGGAGAACTG GACCGCTTGG ACCTAAAACA CTTTGTAACG 
550
CTTGTGGAGT TCGTTACAAA TCAGGGAGGC TTGTACCGGA ATACAGACCG 
600
GCGTCGAGTC CGACGTTTGT ATTGACTCAG CATTCGAACT CTCATCGGAA 
650
AGTTATGGAG CTCCGGCGAC AGAAGGAACA ACAAGAATCT TGCGTTCGAA 
700
TTCCGCCGTT TCAGCCGCAG TAA
750

>AT3G60530.1 longest ORF length:240
MDVYGMSSPD LLRIDDLLDF SNDEIFSSSS TVTSSAASSA ASSENPFSFP 
50
SSTYTSPTLL TDFTHDLCVP SDDAAHLEWL SRFVDDSFSD FPANPLTMTV 
100
RPEISFTGKP RSRRSRAPAP SVAGTWAPMS ESELCHSVAK PKPKKVYNAE 
150
SVTADGARRC THCASEKTPQ WRTGPLGPKT LCNACGVRYK SGRLVPEYRP 
200
ASSPTFVLTQ HSNSHRKVME LRRQKEQQES CVRIPPFQPQ 
250