|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G60580 | C2H2-like zinc finger protein (.1) |
>AT3G60580.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 70, 375, 730, 810 |
| HindIII | A|AGCTT | 50 |
| HpaI | GTT|AAC | 40 |
| SacI | GAGCT|C | 174 |
| XhoI | C|TCGAG | 404 |
Click here to view TAIR data
>AT3G60580.1 length:867
ATGGAGAGTT ACAAGTGCAG GGTTTGCTTT AAGAGCTTCG TTAACGGAAA | 50 |
AGCTTTAGGT GGTCACATGA GATCTCACAT GAGTAATTCA CATGAGGAAG | 100 |
AACAAAGGCC GAGTCAACTC AGTTATGAGA CTGAGTCCGA TGTTTCTTCG | 150 |
TCTGATCCGA AGTTTGCTTT TACGAGCTCT GTTCTTCTTG AAGACGGTGA | 200 |
AAGCGAGAGC GAGTCGTCGA GGAATGTTAT TAACCTGACT CGGAAACGAT | 250 |
CCAAGCGAAC TCGGAAACTC GATTCGTTTG TAACCAAGAA GGTGAAAACG | 300 |
AGTCAACTCG GATACAAGCC TGAGTCTGAT CAAGAGCCTC CTCATAGCTC | 350 |
AGCTTCTGAT ACAACGACGG AGGAAGATCT TGCCTTTTGT CTCATGATGC | 400 |
TCTCTCGAGA TAAATGGAAG AAGAACAAAA GTAATAAAGA AGTAGTGGAA | 450 |
GAGATCGAGA CAGAAGAAGA ATCAGAAGGT TACAACAAGA TTAATCGAGC | 500 |
AACAACGAAA GGAAGATACA AGTGTGAGAC CTGCGGGAAA GTGTTCAAAT | 550 |
CTTATCAAGC ATTAGGTGGG CATAGAGCAA GTCATAAGAA GAACAGAGTA | 600 |
AGTAACAACA AAACAGAGCA ACGAAGCGAA ACAGAGTATG ATAATGTTGT | 650 |
TGTTGTTGCT AAGAGAATCC ATGAATGTCC GATTTGTCTA AGAGTTTTCG | 700 |
CATCGGGACA AGCACTTGGA GGTCACAAAA GATCTCACGG GGTAGGGAAT | 750 |
TTATCTGTGA ATCAACAACG TCGAGTTCAT AGAAACGAGT CTGTGAAACA | 800 |
GAGGATGATA GATCTTAATC TTCCTGCACC AACCGAAGAA GACGAAGTCT | 850 |
CTGTGGTGTT TCAATGA | 900 |
>AT3G60580.1 longest ORF length:288
MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS | 50 |
SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT | 100 |
SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE | 150 |
EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV | 200 |
SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN | 250 |
LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ | 300 |