fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 (.1)

>AT3G60870.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 764
PacI TTAAT|TAA 738
PvuII CAG|CTG 473


Click here to view TAIR data

>AT3G60870.1 length:798
ATGGATGAGG TATCTCGTTC TCATACACCG CAATTTCTAT CAAGTGATCA 
50
TCAGCACTAT CACCATCAAA ACGCTGGACG ACAAAAACGC GGCAGAGAAG 
100
AAGAAGGAGT TGAACCCAAC AATATAGGGG AAGACCTAGC CACCTTTCCT 
150
TCCGGAGAAG AGAATATCAA GAAGAGAAGG CCACGTGGCA GACCTGCTGG 
200
TTCCAAGAAC AAACCCAAAG CACCAATCAT AGTCACTCGC GACTCCGCGA 
250
ACGCCTTCAG ATGTCACGTC ATGGAGATAA CCAACGCCTG CGATGTAATG 
300
GAAAGCCTAG CCGTCTTCGC TAGACGCCGT CAGCGTGGCG TTTGCGTCTT 
350
GACCGGAAAC GGGGCCGTTA CAAACGTCAC CGTTAGACAA CCTGGCGGAG 
400
GCGTCGTCAG TTTACACGGA CGGTTTGAGA TTCTTTCTCT CTCGGGTTCG 
450
TTTCTTCCTC CACCGGCACC ACCAGCTGCG TCTGGTTTAA AGGTTTACTT 
500
AGCCGGTGGT CAAGGTCAAG TGATCGGAGG CAGTGTGGTG GGACCGCTTA 
550
CGGCATCAAG TCCGGTGGTC GTTATGGCAG CTTCATTTGG AAACGCATCT 
600
TACGAGAGGC TGCCACTAGA GGAGGAGGAG GAAACTGAAA GAGAAATAGA 
650
TGGAAACGCG GCTAGGGCGA TTGGAACGCA AACGCAGAAA CAGTTAATGC 
700
AAGATGCGAC ATCGTTTATT GGGTCGCCGT CGAATTTAAT TAACTCTGTT 
750
TCGTTGCCAG GTGAAGCTTA TTGGGGAACG CAACGACCGT CTTTCTAA
800

>AT3G60870.1 longest ORF length:265
MDEVSRSHTP QFLSSDHQHY HHQNAGRQKR GREEEGVEPN NIGEDLATFP 
50
SGEENIKKRR PRGRPAGSKN KPKAPIIVTR DSANAFRCHV MEITNACDVM 
100
ESLAVFARRR QRGVCVLTGN GAVTNVTVRQ PGGGVVSLHG RFEILSLSGS 
150
FLPPPAPPAA SGLKVYLAGG QGQVIGGSVV GPLTASSPVV VMAASFGNAS 
200
YERLPLEEEE ETEREIDGNA ARAIGTQTQK QLMQDATSFI GSPSNLINSV 
250
SLPGEAYWGT QRPSF
300