fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61250 LMI2, ATMYB17 LATE MERISTEM IDENTITY2, myb domain protein 17 (.1)

>AT3G61250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 564
HindIII A|AGCTT 581
NcoI C|CATGG 881
NdeI CA|TATG 392
SacI GAGCT|C 675
SpeI A|CTAGT 622
StyI C|C[AT][AT]GG 46, 881
XbaI T|CTAGA 484
XhoI C|TCGAG 639


Click here to view TAIR data

>AT3G61250.1 length:900
ATGGGAAGAA CACCTTGTTG TGACAAGATT GGTTTGAAGA AAGGTCCTTG 
50
GACGCCTGAA GAAGATGAGG TTCTTGTTGC GCATATCAAG AAAAATGGAC 
100
ATGGAAGCTG GAGAACACTT CCTAAACTTG CTGGTTTACT TCGCTGTGGG 
150
AAGAGTTGCA GGCTGAGATG GACAAACTAT CTGAGACCAG ACATAAAGAG 
200
AGGTCCTTTC ACTGCTGATG AAGAGAAACT TGTTATCCAG CTTCATGCCA 
250
TTCTCGGCAA CAGGTGGGCT GCTATTGCAG CACAGCTTCC AGGAAGAACA 
300
GACAACGAGA TCAAGAACTT ATGGAACACT CATTTGAAGA AACGTCTTTT 
350
ATCTATGGGT CTTGATCCCA GAACTCATGA GCCATTACCT TCATATGGGT 
400
TAGCTAAACA AGCTCCATCT TCACCAACAA CTCGCCACAT GGCTCAATGG 
450
GAAAGTGCTA GGGTTGAAGC TGAGGCAAGG CTTTCTAGAG AATCAATGCT 
500
CTTTAGCCCT TCTTTTTACT CTGGTGTAGT AAAAACTGAA TGTGATCACT 
550
TCTTACGCAT TTGGAATTCC GAGATTGGTG AAGCTTTCAG GAATCTCGCT 
600
CCATTAGATG AATCAACTAT TACTAGTCAA AGCCCTTGCT CGAGGGCAAC 
650
ATCGACCTCA TCTGCACTTC TGAAGAGCTC AACAAATTCT TGGGGAGGGA 
700
AAGAGGTTAC TGTGGCGATT CATGGCTCAG ATTATTCTCC ATATTCAAAT 
750
GATCTTGAAG ATGATTCAAC AGACTCTGCT CTTCAACTTC TGCTTGATTT 
800
CCCTATAAGC GATGATGATA TGAGCTTCTT GGAAGAGAAC ATTGACAGCT 
850
ACTCACAGGC TCCTCCTATT GGTCTTGTTT CCATGGTTTC CAAATTCTAG 
900

>AT3G61250.1 longest ORF length:299
MGRTPCCDKI GLKKGPWTPE EDEVLVAHIK KNGHGSWRTL PKLAGLLRCG 
50
KSCRLRWTNY LRPDIKRGPF TADEEKLVIQ LHAILGNRWA AIAAQLPGRT 
100
DNEIKNLWNT HLKKRLLSMG LDPRTHEPLP SYGLAKQAPS SPTTRHMAQW 
150
ESARVEAEAR LSRESMLFSP SFYSGVVKTE CDHFLRIWNS EIGEAFRNLA 
200
PLDESTITSQ SPCSRATSTS SALLKSSTNS WGGKEVTVAI HGSDYSPYSN 
250
DLEDDSTDSA LQLLLDFPIS DDDMSFLEEN IDSYSQAPPI GLVSMVSKF
300