fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61310 AT hook motif DNA-binding family protein (.1)

>AT3G61310.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
NdeI CA|TATG 1036
NheI G|CTAGC 751
SacI GAGCT|C 667


Click here to view TAIR data

>AT3G61310.1 length:1065
ATGGATCGAA GAGACGCAAT GGCGTTATCC GGGTCGGGTT CTTACTATAT 
50
CCAAAGAGGA ATCCCCGGTT CTGGTCCTCC TCCTCCTCAA ACTCAACCAA 
100
CGTTTCACGG ATCACAAGGA TTTCATCATT TCACCAATTC CATCTCTCCT 
150
TTTGGGTCAA ACCCAAACCC AAATCCAAAC CCTGGAGGTG TCTCTACTGG 
200
ATTCGTGTCT CCTCCTTTAC CCGTTGACTC TTCTCCGGCT GATTCGTCAG 
250
CGGCGGCGGC GGGAGCTTTG GTTGCTCCTC CTTCAGGTGA CACGTCTGTG 
300
AAGCGGAAGA GAGGACGGCC TAGAAAATAT GGACAAGATG GTGGTTCTGT 
350
TTCGTTGGCA TTGTCTCCTT CTATCTCCAA CGTTTCCCCG AACTCTAACA 
400
AACGTGGCCG TGGAAGACCT CCTGGCTCCG GCAAGAAGCA ACGGCTATCT 
450
TCCATTGGTG AAATGATGCC TTCATCAACT GGGATGAGCT TCACACCGCA 
500
TGTAATCGTA GTTTCCATTG GTGAAGACAT TGCTTCAAAG GTTATATCGT 
550
TCTCGCATCA AGGTCCACGA GCGATATGTG TCTTATCCGC AAGTGGTGCT 
600
GTCTCTACTG CAACTCTTCT TCAGCCAGCA CCTTCTCATG GAACTATTAT 
650
ATACGAGGGT CTATTCGAGC TCATATCTCT CTCAACTTCT TATCTGAACA 
700
CAACTGACAA TGACTACCCA AACCGCACTG GAAGTCTAGC GGTCTCACTT 
750
GCTAGCCCCG ATGGTCGTGT CATTGGTGGT GGAATTGGAG GTCCTCTAAT 
800
AGCAGCAAGC CAAGTCCAGG TCATTGTTGG CAGCTTCATT TGGGCAATTC 
850
CGAAAGGGAA GATTAAAAAA CGTGAAGAAA CTTCTGAAGA TGTCCAAGAT 
900
ACTGATGCTT TGGAAAACAA CAACGATAAC ACAGCAGCAA CGTCACCTCC 
950
TGTTCCTCAG CAAAGTCAGA ACATTGTTCA GACTCCTGTA GGCATTTGGT 
1000
CAACTGGTTC AAGGTCAATG GATATGCATC ACCCCCATAT GGACATTGAT 
1050
CTAATGCGTG GATGA
1100

>AT3G61310.1 longest ORF length:354
MDRRDAMALS GSGSYYIQRG IPGSGPPPPQ TQPTFHGSQG FHHFTNSISP 
50
FGSNPNPNPN PGGVSTGFVS PPLPVDSSPA DSSAAAAGAL VAPPSGDTSV 
100
KRKRGRPRKY GQDGGSVSLA LSPSISNVSP NSNKRGRGRP PGSGKKQRLS 
150
SIGEMMPSST GMSFTPHVIV VSIGEDIASK VISFSHQGPR AICVLSASGA 
200
VSTATLLQPA PSHGTIIYEG LFELISLSTS YLNTTDNDYP NRTGSLAVSL 
250
ASPDGRVIGG GIGGPLIAAS QVQVIVGSFI WAIPKGKIKK REETSEDVQD 
300
TDALENNNDN TAATSPPVPQ QSQNIVQTPV GIWSTGSRSM DMHHPHMDID 
350
LMRG
400