fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61830 ARF18 auxin response factor 18 (.1)

>AT3G61830.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 513, 954
KpnI GGTAC|C 877
NcoI C|CATGG 1048
StyI C|C[AT][AT]GG 808, 1048


Click here to view TAIR data

>AT3G61830.1 length:1809
ATGGCGAGTG TTGAAGGTGA TGATGATTTC GGAAGTTCTT CGTCAAGGTC 
50
TTATCAAGAT CAACTATACA CAGAGCTATG GAAAGTTTGT GCAGGTCCAT 
100
TAGTGGAAGT TCCTCGTGCT CAAGAGAGAG TTTTCTACTT CCCTCAGGGT 
150
CACATGGAAC AACTTGTGGC GTCAACTAAT CAAGGAATCA ATTCAGAAGA 
200
AATACCTGTT TTTGATCTTC CTCCAAAGAT ACTTTGTCGA GTTCTTGATG 
250
TCACTTTAAA GGCGGAGCAT GAAACAGATG AGGTTTACGC TCAGATCACA 
300
TTACAACCAG AGGAAGATCA AAGTGAACCA ACAAGTCTTG ATCCACCTAT 
350
TGTTGGACCA ACTAAGCAAG AGTTTCATTC GTTTGTTAAG ATTTTAACGG 
400
CTTCAGATAC AAGCACTCAT GGTGGATTCT CTGTTCTTCG TAAACACGCC 
450
ACTGAATGCT TGCCTTCTTT GGATATGACA CAAGCTACTC CTACTCAAGA 
500
ACTTGTGACT AGAGATCTTC ATGGCTTTGA ATGGAGGTTT AAGCATATAT 
550
TCAGAGGACA ACCACGGAGG CATTTGCTTA CTACGGGTTG GAGTACATTT 
600
GTATCCTCGA AAAGACTTGT AGCTGGAGAT GCTTTTGTGT TCTTGAGGGG 
650
TGAGAATGGG GATTTACGGG TTGGAGTGAG ACGATTAGCT CGGCATCAAA 
700
GCACAATGCC TACTTCGGTT ATTTCAAGTC AGAGCATGCA TTTGGGAGTT 
750
CTTGCTACAG CTTCTCATGC TGTGCGTACA ACAACAATCT TTGTTGTCTT 
800
TTACAAGCCT AGGATAAGCC AATTCATAGT TGGGGTGAAC AAGTATATGG 
850
AAGCTATAAA GCATGGATTT TCTCTCGGTA CCCGATTCAG AATGAGGTTT 
900
GAAGGAGAAG AGTCTCCTGA GAGAATATTT ACTGGTACGA TTGTGGGAAG 
950
TGGAGATCTA TCTTCACAAT GGCCAGCTTC TAAATGGAGG TCATTGCAGG 
1000
TACAATGGGA TGAGCCAACA ACAGTTCAGA GACCAGATAA AGTCTCACCA 
1050
TGGGAGATAG AGCCTTTCTT GGCAACTTCC CCAATTTCAA CTCCTGCTCA 
1100
ACAACCACAA TCGAAATGCA AGCGGTCAAG ACCCATCGAG CCATCAGTTA 
1150
AAACACCAGC CCCACCTAGT TTCTTGTACA GCCTCCCTCA GAGCCAAGAT 
1200
TCCATTAATG CATCCCTTAA ACTGTTTCAA GATCCATCAC TTGAGAGAAT 
1250
TTCAGGTGGA TACTCCTCAA ACAACAGCTT CAAACCCGAG ACTCCTCCTC 
1300
CTCCAACGAA TTGTAGCTAT AGGTTGTTTG GATTTGATCT CACAAGCAAT 
1350
TCTCCTGCTC CAATCCCTCA AGACAAGCAA CCGATGGATA CTTGTGGAGC 
1400
TGCCAAGTGT CAAGAACCCA TCACTCCAAC CTCAATGAGT GAGCAGAAGA 
1450
AGCAACAAAC ATCAAGAAGT CGAACTAAAG TGCAAATGCA AGGCATTGCG 
1500
GTTGGTCGTG CGGTTGATTT AACACTGTTG AAATCTTACG ATGAACTGAT 
1550
TGATGAGCTT GAGGAGATGT TTGAGATTCA AGGACAGCTT CTTGCCCGAG 
1600
ACAAATGGAT CGTTGTCTTC ACTGATGATG AAGGAGATAT GATGCTTGCT 
1650
GGTGATGATC CGTGGAATGA GTTTTGCAAG ATGGCAAAGA AGATATTTAT 
1700
ATATTCGAGC GATGAGGTTA AGAAAATGAC AACGAAACTG AAGATTTCTT 
1750
CGTCGTTAGA GAATGAGGAA TATGGTAATG AATCATTCGA AAATCGTAGT 
1800
AGGGGGTGA
1850

>AT3G61830.1 longest ORF length:602
MASVEGDDDF GSSSSRSYQD QLYTELWKVC AGPLVEVPRA QERVFYFPQG 
50
HMEQLVASTN QGINSEEIPV FDLPPKILCR VLDVTLKAEH ETDEVYAQIT 
100
LQPEEDQSEP TSLDPPIVGP TKQEFHSFVK ILTASDTSTH GGFSVLRKHA 
150
TECLPSLDMT QATPTQELVT RDLHGFEWRF KHIFRGQPRR HLLTTGWSTF 
200
VSSKRLVAGD AFVFLRGENG DLRVGVRRLA RHQSTMPTSV ISSQSMHLGV 
250
LATASHAVRT TTIFVVFYKP RISQFIVGVN KYMEAIKHGF SLGTRFRMRF 
300
EGEESPERIF TGTIVGSGDL SSQWPASKWR SLQVQWDEPT TVQRPDKVSP 
350
WEIEPFLATS PISTPAQQPQ SKCKRSRPIE PSVKTPAPPS FLYSLPQSQD 
400
SINASLKLFQ DPSLERISGG YSSNNSFKPE TPPPPTNCSY RLFGFDLTSN 
450
SPAPIPQDKQ PMDTCGAAKC QEPITPTSMS EQKKQQTSRS RTKVQMQGIA 
500
VGRAVDLTLL KSYDELIDEL EEMFEIQGQL LARDKWIVVF TDDEGDMMLA 
550
GDDPWNEFCK MAKKIFIYSS DEVKKMTTKL KISSSLENEE YGNESFENRS 
600
RG
650