fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61850 DAG1, AtDof3,7 dof affecting germination 1, Dof-type zinc finger DNA-binding family protein (.1.2.3.4)

>AT3G61850.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 390, 444
SacI GAGCT|C 698


Click here to view TAIR data

>AT3G61850.2 length:855
ATGATAAACG TAAAGCCAAT GGAGCAAATG ATTTCTAGCA CCAACAACAA 
50
CACACCGCAA CAACAACCAA CATTCATCGC CACCAACACA AGGCCAAACG 
100
CCACCGCATC CAATGGTGGC TCCGGAGGAA ATACCAACAA CACGGCTACG 
150
ATGGAAACTA GAAAGGCGAG GCCACAAGAG AAAGTAAATT GTCCAAGATG 
200
CAACTCAACA AACACAAAGT TCTGTTATTA CAACAACTAC AGTCTCACGC 
250
AACCAAGATA CTTCTGCAAA GGTTGTCGAA GGTATTGGAC CGAAGGTGGC 
300
TCTCTTCGTA ACGTCCCAGT CGGAGGTAGC TCAAGAAAGA ACAAGAGATC 
350
CTCTACACCT TTAGCTTCAC CTTCTAATCC CAAACTTCCA GATCTAAACC 
400
CACCGATTCT TTTCTCAAGC CAAATCCCTA ATAAGTCAAA TAAAGATCTC 
450
AACTTGCTAT CTTTCCCGGT CATGCAAGAT CATCATCATC ATGCTCTTGA 
500
GCTTCTAAGA TCCAATGGAG TCTCTTCAAG AGGCATGAAC ACGTTCTTGC 
550
CTGGTCAAAT GATGGATTCA AACTCAGTCC TGTACTCATC TTTAGGGTTT 
600
CCAACAATGC CTGATTACAA ACAGAGTAAT AACAACCTTT CATTCTCCAT 
650
TGATCATCAT CAAGGGATTG GACATAACAC CATCAACAGT AACCAAAGAG 
700
CTCAAGATAA CAATGATGAC ATGAATGGAG CAAGTAGGGT TTTGTTCCCT 
750
TTTTCAGACA TGAAAGAGCT TTCAAGCACA ACCCAAGAGA AGAGTCATGG 
800
TAATAATACA TATTGGAATG GGATGTTCAG TAATACAGGA GGATCTTCAT 
850
GGTGA
900

>AT3G61850.2 longest ORF length:284
MINVKPMEQM ISSTNNNTPQ QQPTFIATNT RPNATASNGG SGGNTNNTAT 
50
METRKARPQE KVNCPRCNST NTKFCYYNNY SLTQPRYFCK GCRRYWTEGG 
100
SLRNVPVGGS SRKNKRSSTP LASPSNPKLP DLNPPILFSS QIPNKSNKDL 
150
NLLSFPVMQD HHHHALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF 
200
PTMPDYKQSN NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP 
250
FSDMKELSST TQEKSHGNNT YWNGMFSNTG GSSW
300