fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61850 DAG1, AtDof3,7 dof affecting germination 1, Dof-type zinc finger DNA-binding family protein (.1.2.3.4)

>AT3G61850.4 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 426, 480
NdeI CA|TATG 547
SacI GAGCT|C 818


Click here to view TAIR data

>AT3G61850.4 length:975
ATGGATGCTA CGAAGTGGAC TCAGGGTTTT CAAGAAATGA TAAACGTAAA 
50
GCCAATGGAG CAAATGATTT CTAGCACCAA CAACAACACA CCGCAACAAC 
100
AACCAACATT CATCGCCACC AACACAAGGC CAAACGCCAC CGCATCCAAT 
150
GGTGGCTCCG GAGGAAATAC CAACAACACG GCTACGATGG AAACTAGAAA 
200
GGCGAGGCCA CAAGAGAAAG TAAATTGTCC AAGATGCAAC TCAACAAACA 
250
CAAAGTTCTG TTATTACAAC AACTACAGTC TCACGCAACC AAGATACTTC 
300
TGCAAAGGTT GTCGAAGGTA TTGGACCGAA GGTGGCTCTC TTCGTAACGT 
350
CCCAGTCGGA GGTAGCTCAA GAAAGAACAA GAGATCCTCT ACACCTTTAG 
400
CTTCACCTTC TAATCCCAAA CTTCCAGATC TAAACCCACC GATTCTTTTC 
450
TCAAGCCAAA TCCCTAATAA GTCAAATAAA GATCTCAACT TGCTATCTTT 
500
CCCGGTCATG CAAGATCATC ATCATCATGG TATGTCTCAT TTTTTTCATA 
550
TGCCCAAGAT AGAGAACAAC AATACTTCAT CCTCAATCTA TGCTTCATCA 
600
TCTCCTGTCT CAGCTCTTGA GCTTCTAAGA TCCAATGGAG TCTCTTCAAG 
650
AGGCATGAAC ACGTTCTTGC CTGGTCAAAT GATGGATTCA AACTCAGTCC 
700
TGTACTCATC TTTAGGGTTT CCAACAATGC CTGATTACAA ACAGAGTAAT 
750
AACAACCTTT CATTCTCCAT TGATCATCAT CAAGGGATTG GACATAACAC 
800
CATCAACAGT AACCAAAGAG CTCAAGATAA CAATGATGAC ATGAATGGAG 
850
CAAGTAGGGT TTTGTTCCCT TTTTCAGACA TGAAAGAGCT TTCAAGCACA 
900
ACCCAAGAGA AGAGTCATGG TAATAATACA TATTGGAATG GGATGTTCAG 
950
TAATACAGGA GGATCTTCAT GGTGA
1000

>AT3G61850.4 longest ORF length:324
MDATKWTQGF QEMINVKPME QMISSTNNNT PQQQPTFIAT NTRPNATASN 
50
GGSGGNTNNT ATMETRKARP QEKVNCPRCN STNTKFCYYN NYSLTQPRYF 
100
CKGCRRYWTE GGSLRNVPVG GSSRKNKRSS TPLASPSNPK LPDLNPPILF 
150
SSQIPNKSNK DLNLLSFPVM QDHHHHGMSH FFHMPKIENN NTSSSIYASS 
200
SPVSALELLR SNGVSSRGMN TFLPGQMMDS NSVLYSSLGF PTMPDYKQSN 
250
NNLSFSIDHH QGIGHNTINS NQRAQDNNDD MNGASRVLFP FSDMKELSST 
300
TQEKSHGNNT YWNGMFSNTG GSSW
350