Locus |
Common name |
Short description |
AT3G61950 |
bHLH067 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT3G61950.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AlwI, Aor51HI(Eco47III), AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PstI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp45I, Tth111I, XbaI, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
563 |
AciI
| C|CGC |
310 |
AgeI
| A|CCGGT |
291 |
AhdI
| GACNNN|NNGTC |
1017 |
AluI
| AG|CT |
92, 122, 334, 634, 829, 918 |
AlwNI
| CAGNNN|CTG |
154 |
ApaI
| GGGCC|C |
596 |
ApaLI
| G|TGCAC |
410 |
ApoI
| Pu|AATTPy |
353 |
AvaI
| C|PyCGPuG |
64, 676 |
AvaII
| G|G[AT]CC |
293, 671 |
BanII
| GPuGCPy|C |
596 |
BfaI
| C|TAG |
462 |
BsaAI
| PyAC|GTPu |
664 |
BsaHI
| GPu|CGPyC |
563 |
BsaJI
| C|CNNGG |
241 |
BsaWI
| [AT]|CCGG[AT] |
48, 291 |
BsiEI
| CGPuPy|CG |
39 |
BsiHKAI
| G[AT]GC[AT]|C |
410 |
BslI
| CCNNNNN|NNGG |
317, 995 |
BsoBI
| C|PyCGPuG |
64, 676 |
Bsp1286I
| G[GAT]GC[CAT]|C |
410, 596 |
BsrFI
| Pu|CCGGPy |
291 |
BssKI
| |CCNGG |
593 |
BstF5I
| GGATGNN| |
52 |
Cfr10I
| [AG]|CCGG[TC] |
291 |
DdeI
| C|TNAG |
301, 405, 764, 1013 |
DpnI
| GA-CH3|TC |
38, 803 |
DpnII
| |GATC |
38, 803 |
DraIII
| CACNNN|GTG |
407 |
DrdI
| GACNNNN|NNGTC |
216 |
EcoO109I
| PuG|GNCCPy |
597, 672 |
EcoRV
| GAT|ATC |
257 |
Fnu4HI
| GC|NGC |
155, 446, 1038 |
HaeIII
| GG|CC |
595 |
HhaI
| GCG|C |
427 |
HinP1I
| G|CGC |
427 |
HindIII
| A|AGCTT |
93, 123, 635, 919 |
HinfI
| G|ANTC |
273, 521, 699, 901, 1017 |
HpaII
| C|CGG |
47, 290, 592 |
Hpy188I
| TCN|GA |
206, 300, 1049, 1064 |
Hpy99I
| CG[AT]CG| |
775, 1025 |
HpyCH4III
| ACN|GT |
135, 215, 730, 834, 930 |
HpyCH4IV
| A|CGT |
562, 663 |
HpyCH4V
| TG|CA |
79, 156, 409 |
MboI
| |GATC |
38, 803 |
MseI
| T|TAA |
753, 858, 921 |
MspI
| C|CGG |
47, 290, 592 |
MwoI
| GCNNNNN|NNGC |
333 |
N.BstNBI
| GAGTCNNNN|N |
1022 |
NciI
| CC|[CG]GG |
593 |
NlaIII
| CATG| |
316, 373, 848 |
NlaIV
| GGN|NCC |
237, 325, 596 |
PaeR7I
| C|TCGAG |
64, 676 |
PpuMI
| PuG|G[AT]CCPy |
672 |
PspOMI
| G|GGCCC |
596 |
PvuI
| CGAT|CG |
39 |
Sau3AI
| |GATC |
38, 803 |
Sau96I
| G|GNCC |
293, 595, 671 |
ScrFI
| CC|NGG |
593 |
SfcI
| C|TPuPyAG |
148, 833 |
SmlI
| C|TPyPuAG |
64, 232, 268, 452, 676, 991 |
StyI
| C|C[AT][AT]GG |
241 |
Taqƒ¿I
| T|CGA |
36, 40, 63, 249, 675, 696, 776, 825, 1056 |
TfiI
| G|A[AT]TC |
273, 521, 699, 901 |
TliI
| C|TCGAG |
64, 676 |
TseI
| G|C[AT]GC |
155, 446 |
Tsp509I
| |AATT |
279, 352, 1069 |
TspRI
| NNCA[CG]TGNN| |
409, 733, 837, 931 |
XcmI
| CCANNNNN|NNNNTGG |
317 |
XhoI
| C|TCGAG |
64, 676 |
XmnI
| GAANN|NNTTC |
8 |
Click here to view TAIR data
>AT3G61950.1 length:1077
ATGGAAAGGT TTCAAGGACA CATCAACCCC TGTTTCTTCG ATCGAAAACC | 50 |
GGATGTGAGA AGCCTCGAGG TTCAAGGATT TGCAGAGGCT CAAAGCTTTG | 100 |
CTTTCAAAGA AAAAGAGGAA GAAAGCTTAC AAGATACAGT TCCATTTCTA | 150 |
CAGATGCTGC AAAGTGAAGA CCCCTCATCG TTTTTTTCAA TCAAAGAGCC | 200 |
AAACTTTCTG ACGCTACTGT CTCTTCAAAC CCTCAAGGAG CCTTGGGAAC | 250 |
TCGAAAGATA TCTTTCACTT GAGGATTCAC AATTTCATTC ACCGGTCCAA | 300 |
TCTGAGACCA ACCGCTTCAT GGAAGGAGCC AATCAAGCTG TGTCAAGCCA | 350 |
AGAAATTCCC TTTAGCCAAG CAAACATGAC ACTCCCTTCT TCTACCTCAT | 400 |
CACCACTCAG TGCACATTCA AGACGAAAGC GCAAAATCAA CCACTTGCTG | 450 |
CCTCAAGAAA TGACTAGAGA AAAGAGAAAG AGGAGGAAAA CAAAACCAAG | 500 |
TAAAAACAAT GAAGAGATTG AGAATCAAAG AATAAACCAC ATTGCTGTTG | 550 |
AACGAAACAG AAGACGTCAA ATGAACGAAC ATATCAACTC TCTCCGGGCC | 600 |
CTTCTCCCAC CTTCCTACAT CCAACGAGGA GACCAAGCTT CCATAGTAGG | 650 |
AGGAGCAATA AACTACGTGA AGGTCCTCGA GCAAATCATA CAATCTCTCG | 700 |
AATCGCAAAA GAGAACGCAA CAACAAAGTA ACAGTGAGGT AGTAGAAAAC | 750 |
GCACTTAATC ATCTCTCAGG CATTTCGTCG AACGACCTGT GGACAACTCT | 800 |
TGAAGATCAA ACTTGTATCC CCAAAATCGA AGCTACAGTG ATACAAAACC | 850 |
ATGTCAGCCT TAAAGTTCAA TGTGAGAAGA AACAAGGACA ACTTCTCAAA | 900 |
GGAATCATAT CACTTGAAAA GCTTAAACTC ACTGTTCTTC ATCTCAATAT | 950 |
CACTACTTCG TCTCATTCCT CTGTTTCTTA TTCCTTCAAC CTCAAGATGG | 1000 |
AAGATGAGTG CGACTTAGAG TCAGCCGACG AGATTACGGC GGCTGTTCAT | 1050 |
CGGATTTTCG ATATTCCGAC AATTTGA | 1100 |
>AT3G61950.1 longest ORF length:358
MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL | 50 |
QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ | 100 |
SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL | 150 |
PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA | 200 |
LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN | 250 |
ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK | 300 |
GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH | 350 |
RIFDIPTI | 400 |
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