fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61950 bHLH067 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G61950.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
ApaI GGGCC|C 596
EcoRV GAT|ATC 257
HindIII A|AGCTT 93, 123, 635, 919
StyI C|C[AT][AT]GG 241
XhoI C|TCGAG 64, 676


Click here to view TAIR data

>AT3G61950.1 length:1077
ATGGAAAGGT TTCAAGGACA CATCAACCCC TGTTTCTTCG ATCGAAAACC 
50
GGATGTGAGA AGCCTCGAGG TTCAAGGATT TGCAGAGGCT CAAAGCTTTG 
100
CTTTCAAAGA AAAAGAGGAA GAAAGCTTAC AAGATACAGT TCCATTTCTA 
150
CAGATGCTGC AAAGTGAAGA CCCCTCATCG TTTTTTTCAA TCAAAGAGCC 
200
AAACTTTCTG ACGCTACTGT CTCTTCAAAC CCTCAAGGAG CCTTGGGAAC 
250
TCGAAAGATA TCTTTCACTT GAGGATTCAC AATTTCATTC ACCGGTCCAA 
300
TCTGAGACCA ACCGCTTCAT GGAAGGAGCC AATCAAGCTG TGTCAAGCCA 
350
AGAAATTCCC TTTAGCCAAG CAAACATGAC ACTCCCTTCT TCTACCTCAT 
400
CACCACTCAG TGCACATTCA AGACGAAAGC GCAAAATCAA CCACTTGCTG 
450
CCTCAAGAAA TGACTAGAGA AAAGAGAAAG AGGAGGAAAA CAAAACCAAG 
500
TAAAAACAAT GAAGAGATTG AGAATCAAAG AATAAACCAC ATTGCTGTTG 
550
AACGAAACAG AAGACGTCAA ATGAACGAAC ATATCAACTC TCTCCGGGCC 
600
CTTCTCCCAC CTTCCTACAT CCAACGAGGA GACCAAGCTT CCATAGTAGG 
650
AGGAGCAATA AACTACGTGA AGGTCCTCGA GCAAATCATA CAATCTCTCG 
700
AATCGCAAAA GAGAACGCAA CAACAAAGTA ACAGTGAGGT AGTAGAAAAC 
750
GCACTTAATC ATCTCTCAGG CATTTCGTCG AACGACCTGT GGACAACTCT 
800
TGAAGATCAA ACTTGTATCC CCAAAATCGA AGCTACAGTG ATACAAAACC 
850
ATGTCAGCCT TAAAGTTCAA TGTGAGAAGA AACAAGGACA ACTTCTCAAA 
900
GGAATCATAT CACTTGAAAA GCTTAAACTC ACTGTTCTTC ATCTCAATAT 
950
CACTACTTCG TCTCATTCCT CTGTTTCTTA TTCCTTCAAC CTCAAGATGG 
1000
AAGATGAGTG CGACTTAGAG TCAGCCGACG AGATTACGGC GGCTGTTCAT 
1050
CGGATTTTCG ATATTCCGAC AATTTGA
1100

>AT3G61950.1 longest ORF length:358
MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL 
50
QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ 
100
SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL 
150
PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA 
200
LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN 
250
ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK 
300
GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH 
350
RIFDIPTI
400