Locus |
Common name |
Short description |
AT3G61950 |
bHLH067 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT3G61950.2 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AlwI, AlwNI, Aor51HI(Eco47III), AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp45I, Tth111I, XbaI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
410 |
AciI
| C|CGC |
157 |
AgeI
| A|CCGGT |
138 |
AhdI
| GACNNN|NNGTC |
864 |
AluI
| AG|CT |
181, 481, 676, 765 |
ApaI
| GGGCC|C |
443 |
ApaLI
| G|TGCAC |
257 |
ApoI
| Pu|AATTPy |
200 |
AvaI
| C|PyCGPuG |
523 |
AvaII
| G|G[AT]CC |
140, 518 |
BanII
| GPuGCPy|C |
443 |
BfaI
| C|TAG |
309 |
BsaAI
| PyAC|GTPu |
511 |
BsaHI
| GPu|CGPyC |
410 |
BsaJI
| C|CNNGG |
88 |
BsaWI
| [AT]|CCGG[AT] |
138 |
BsiHKAI
| G[AT]GC[AT]|C |
257 |
BslI
| CCNNNNN|NNGG |
164, 842 |
BsoBI
| C|PyCGPuG |
523 |
Bsp1286I
| G[GAT]GC[CAT]|C |
257, 443 |
BsrFI
| Pu|CCGGPy |
138 |
BssKI
| |CCNGG |
440 |
Cfr10I
| [AG]|CCGG[TC] |
138 |
DdeI
| C|TNAG |
148, 252, 611, 860 |
DpnI
| GA-CH3|TC |
650 |
DpnII
| |GATC |
650 |
DraIII
| CACNNN|GTG |
254 |
DrdI
| GACNNNN|NNGTC |
63 |
EcoO109I
| PuG|GNCCPy |
444, 519 |
EcoRV
| GAT|ATC |
104 |
Fnu4HI
| GC|NGC |
2, 293, 885 |
HaeIII
| GG|CC |
442 |
HhaI
| GCG|C |
274 |
HinP1I
| G|CGC |
274 |
HindIII
| A|AGCTT |
482, 766 |
HinfI
| G|ANTC |
120, 368, 546, 748, 864 |
HpaII
| C|CGG |
137, 439 |
Hpy188I
| TCN|GA |
53, 147, 896, 911 |
Hpy99I
| CG[AT]CG| |
622, 872 |
HpyCH4III
| ACN|GT |
62, 577, 681, 777 |
HpyCH4IV
| A|CGT |
409, 510 |
HpyCH4V
| TG|CA |
3, 256 |
MboI
| |GATC |
650 |
MseI
| T|TAA |
600, 705, 768 |
MspI
| C|CGG |
137, 439 |
MwoI
| GCNNNNN|NNGC |
180 |
N.BstNBI
| GAGTCNNNN|N |
869 |
NciI
| CC|[CG]GG |
440 |
NlaIII
| CATG| |
163, 220, 695 |
NlaIV
| GGN|NCC |
84, 172, 443 |
PaeR7I
| C|TCGAG |
523 |
PpuMI
| PuG|G[AT]CCPy |
519 |
PspOMI
| G|GGCCC |
443 |
Sau3AI
| |GATC |
650 |
Sau96I
| G|GNCC |
140, 442, 518 |
ScrFI
| CC|NGG |
440 |
SfcI
| C|TPuPyAG |
680 |
SmlI
| C|TPyPuAG |
79, 115, 299, 523, 838 |
StyI
| C|C[AT][AT]GG |
88 |
Taqƒ¿I
| T|CGA |
96, 522, 543, 623, 672, 903 |
TfiI
| G|A[AT]TC |
120, 368, 546, 748 |
TliI
| C|TCGAG |
523 |
TseI
| G|C[AT]GC |
2, 293 |
Tsp509I
| |AATT |
126, 199, 916 |
TspRI
| NNCA[CG]TGNN| |
256, 580, 684, 778 |
XcmI
| CCANNNNN|NNNNTGG |
164 |
XhoI
| C|TCGAG |
523 |
Click here to view TAIR data
>AT3G61950.2 length:924
ATGCTGCAAA GTGAAGACCC CTCATCGTTT TTTTCAATCA AAGAGCCAAA | 50 |
CTTTCTGACG CTACTGTCTC TTCAAACCCT CAAGGAGCCT TGGGAACTCG | 100 |
AAAGATATCT TTCACTTGAG GATTCACAAT TTCATTCACC GGTCCAATCT | 150 |
GAGACCAACC GCTTCATGGA AGGAGCCAAT CAAGCTGTGT CAAGCCAAGA | 200 |
AATTCCCTTT AGCCAAGCAA ACATGACACT CCCTTCTTCT ACCTCATCAC | 250 |
CACTCAGTGC ACATTCAAGA CGAAAGCGCA AAATCAACCA CTTGCTGCCT | 300 |
CAAGAAATGA CTAGAGAAAA GAGAAAGAGG AGGAAAACAA AACCAAGTAA | 350 |
AAACAATGAA GAGATTGAGA ATCAAAGAAT AAACCACATT GCTGTTGAAC | 400 |
GAAACAGAAG ACGTCAAATG AACGAACATA TCAACTCTCT CCGGGCCCTT | 450 |
CTCCCACCTT CCTACATCCA ACGAGGAGAC CAAGCTTCCA TAGTAGGAGG | 500 |
AGCAATAAAC TACGTGAAGG TCCTCGAGCA AATCATACAA TCTCTCGAAT | 550 |
CGCAAAAGAG AACGCAACAA CAAAGTAACA GTGAGGTAGT AGAAAACGCA | 600 |
CTTAATCATC TCTCAGGCAT TTCGTCGAAC GACCTGTGGA CAACTCTTGA | 650 |
AGATCAAACT TGTATCCCCA AAATCGAAGC TACAGTGATA CAAAACCATG | 700 |
TCAGCCTTAA AGTTCAATGT GAGAAGAAAC AAGGACAACT TCTCAAAGGA | 750 |
ATCATATCAC TTGAAAAGCT TAAACTCACT GTTCTTCATC TCAATATCAC | 800 |
TACTTCGTCT CATTCCTCTG TTTCTTATTC CTTCAACCTC AAGATGGAAG | 850 |
ATGAGTGCGA CTTAGAGTCA GCCGACGAGA TTACGGCGGC TGTTCATCGG | 900 |
ATTTTCGATA TTCCGACAAT TTGA | 950 |
>AT3G61950.2 longest ORF length:307
MLQSEDPSSF FSIKEPNFLT LLSLQTLKEP WELERYLSLE DSQFHSPVQS | 50 |
ETNRFMEGAN QAVSSQEIPF SQANMTLPSS TSSPLSAHSR RKRKINHLLP | 100 |
QEMTREKRKR RKTKPSKNNE EIENQRINHI AVERNRRRQM NEHINSLRAL | 150 |
LPPSYIQRGD QASIVGGAIN YVKVLEQIIQ SLESQKRTQQ QSNSEVVENA | 200 |
LNHLSGISSN DLWTTLEDQT CIPKIEATVI QNHVSLKVQC EKKQGQLLKG | 250 |
IISLEKLKLT VLHLNITTSS HSSVSYSFNL KMEDECDLES ADEITAAVHR | 300 |
IFDIPTI | 350 |
|