fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61950 bHLH067 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT3G61950.2 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
ApaI GGGCC|C 443
EcoRV GAT|ATC 104
HindIII A|AGCTT 482, 766
StyI C|C[AT][AT]GG 88
XhoI C|TCGAG 523


Click here to view TAIR data

>AT3G61950.2 length:924
ATGCTGCAAA GTGAAGACCC CTCATCGTTT TTTTCAATCA AAGAGCCAAA 
50
CTTTCTGACG CTACTGTCTC TTCAAACCCT CAAGGAGCCT TGGGAACTCG 
100
AAAGATATCT TTCACTTGAG GATTCACAAT TTCATTCACC GGTCCAATCT 
150
GAGACCAACC GCTTCATGGA AGGAGCCAAT CAAGCTGTGT CAAGCCAAGA 
200
AATTCCCTTT AGCCAAGCAA ACATGACACT CCCTTCTTCT ACCTCATCAC 
250
CACTCAGTGC ACATTCAAGA CGAAAGCGCA AAATCAACCA CTTGCTGCCT 
300
CAAGAAATGA CTAGAGAAAA GAGAAAGAGG AGGAAAACAA AACCAAGTAA 
350
AAACAATGAA GAGATTGAGA ATCAAAGAAT AAACCACATT GCTGTTGAAC 
400
GAAACAGAAG ACGTCAAATG AACGAACATA TCAACTCTCT CCGGGCCCTT 
450
CTCCCACCTT CCTACATCCA ACGAGGAGAC CAAGCTTCCA TAGTAGGAGG 
500
AGCAATAAAC TACGTGAAGG TCCTCGAGCA AATCATACAA TCTCTCGAAT 
550
CGCAAAAGAG AACGCAACAA CAAAGTAACA GTGAGGTAGT AGAAAACGCA 
600
CTTAATCATC TCTCAGGCAT TTCGTCGAAC GACCTGTGGA CAACTCTTGA 
650
AGATCAAACT TGTATCCCCA AAATCGAAGC TACAGTGATA CAAAACCATG 
700
TCAGCCTTAA AGTTCAATGT GAGAAGAAAC AAGGACAACT TCTCAAAGGA 
750
ATCATATCAC TTGAAAAGCT TAAACTCACT GTTCTTCATC TCAATATCAC 
800
TACTTCGTCT CATTCCTCTG TTTCTTATTC CTTCAACCTC AAGATGGAAG 
850
ATGAGTGCGA CTTAGAGTCA GCCGACGAGA TTACGGCGGC TGTTCATCGG 
900
ATTTTCGATA TTCCGACAAT TTGA
950

>AT3G61950.2 longest ORF length:307
MLQSEDPSSF FSIKEPNFLT LLSLQTLKEP WELERYLSLE DSQFHSPVQS 
50
ETNRFMEGAN QAVSSQEIPF SQANMTLPSS TSSPLSAHSR RKRKINHLLP 
100
QEMTREKRKR RKTKPSKNNE EIENQRINHI AVERNRRRQM NEHINSLRAL 
150
LPPSYIQRGD QASIVGGAIN YVKVLEQIIQ SLESQKRTQQ QSNSEVVENA 
200
LNHLSGISSN DLWTTLEDQT CIPKIEATVI QNHVSLKVQC EKKQGQLLKG 
250
IISLEKLKLT VLHLNITTSS HSSVSYSFNL KMEDECDLES ADEITAAVHR 
300
IFDIPTI
350