fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G61970 NGA2 NGATHA2, AP2/B3-like transcriptional factor family protein (.1)

>AT3G61970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 513
HindIII A|AGCTT 35, 304, 358
StyI C|C[AT][AT]GG 433


Click here to view TAIR data

>AT3G61970.1 length:900
ATGAATCAAG AAGATAAAGA GAAGCCTATT GAAGAAGCTT CTTCATCAAT 
50
GGAGAGAGAA CACATGTTCG ACAAAGTAGT AACACCAAGC GACGTTGGCA 
100
AACTAAACCG ACTCGTGATC CCTAAGCAAC ACGCAGAGAG ATACTTCCCA 
150
TTAGATAACT CCACAACAAA CGACAGCAAC AAAGGTTTGC TTCTAAACTT 
200
CGAAGATCGA AGTGGAAACT CATGGAGGTT CCGTTACTCT TACTGGAACA 
250
GTAGTCAAAG CTATGTCATG ACTAAAGGTT GGAGCCGTTT TGTCAAAGAC 
300
AAGAAGCTTG ATGCTGGAGA CATCGTTTCT TTTCAGAGAG ATTCTTGTAA 
350
TAAAGACAAG CTTTACATCG ATTGGAGGAG ACGACCTAAG ATTCCCGATC 
400
ATCATCATCA GCAATTCGCC GGAGCTATGT TCCCTAGGTT TTACACTTTT 
450
CCTCATCCTC AGATGCCGAC AAATTACGAA ACTCACAACC TTTATCATCG 
500
ATTTCATCAA CGAGATCTAG GAATTGGATA CTATGTGAGG TCAATGGAGA 
550
GGAGTCATCC AACGGCTGTG ATTGAATCTG TGCCGGTGAT GATGCAAAGG 
600
AGAGCACAAG TGGCTTCAAT GGCTTCGAGA GGAGAGAAGC GGTTAAGGCT 
650
GTTTGGTGTA GATATGGAGT GCGGAGGAGG AGGAGGGAGT GTGAATAGTA 
700
CGGAGGAAGA GTCGTCGTCT TCCGGTGGTA GTATACCACG TGGCAGAGTT 
750
TCTATGGTTG GTGCTGGTTC TCTCCTCCAG TTGAGGTTAG TGAGCAGTGA 
800
TGATGAGTCT TTAGTAGCAA TGGAAGCTGC AAGTCTTGAG GATCATCACT 
850
TCTTTACAAA GAAAGGAAAA CCTTCTTTGT CTTTTGATTT GGATAGGTGA 
900

>AT3G61970.1 longest ORF length:299
MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP 
50
LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD 
100
KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF 
150
PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR 
200
RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV 
250
SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
300