Locus |
Common name |
Short description |
AT3G61970 |
NGA2 |
NGATHA2, AP2/B3-like transcriptional factor family protein (.1) |
>AT3G61970.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
513 |
HindIII
| A|AGCTT |
35, 304, 358 |
StyI
| C|C[AT][AT]GG |
433 |
Click here to view TAIR data
>AT3G61970.1 length:900
ATGAATCAAG AAGATAAAGA GAAGCCTATT GAAGAAGCTT CTTCATCAAT | 50 |
GGAGAGAGAA CACATGTTCG ACAAAGTAGT AACACCAAGC GACGTTGGCA | 100 |
AACTAAACCG ACTCGTGATC CCTAAGCAAC ACGCAGAGAG ATACTTCCCA | 150 |
TTAGATAACT CCACAACAAA CGACAGCAAC AAAGGTTTGC TTCTAAACTT | 200 |
CGAAGATCGA AGTGGAAACT CATGGAGGTT CCGTTACTCT TACTGGAACA | 250 |
GTAGTCAAAG CTATGTCATG ACTAAAGGTT GGAGCCGTTT TGTCAAAGAC | 300 |
AAGAAGCTTG ATGCTGGAGA CATCGTTTCT TTTCAGAGAG ATTCTTGTAA | 350 |
TAAAGACAAG CTTTACATCG ATTGGAGGAG ACGACCTAAG ATTCCCGATC | 400 |
ATCATCATCA GCAATTCGCC GGAGCTATGT TCCCTAGGTT TTACACTTTT | 450 |
CCTCATCCTC AGATGCCGAC AAATTACGAA ACTCACAACC TTTATCATCG | 500 |
ATTTCATCAA CGAGATCTAG GAATTGGATA CTATGTGAGG TCAATGGAGA | 550 |
GGAGTCATCC AACGGCTGTG ATTGAATCTG TGCCGGTGAT GATGCAAAGG | 600 |
AGAGCACAAG TGGCTTCAAT GGCTTCGAGA GGAGAGAAGC GGTTAAGGCT | 650 |
GTTTGGTGTA GATATGGAGT GCGGAGGAGG AGGAGGGAGT GTGAATAGTA | 700 |
CGGAGGAAGA GTCGTCGTCT TCCGGTGGTA GTATACCACG TGGCAGAGTT | 750 |
TCTATGGTTG GTGCTGGTTC TCTCCTCCAG TTGAGGTTAG TGAGCAGTGA | 800 |
TGATGAGTCT TTAGTAGCAA TGGAAGCTGC AAGTCTTGAG GATCATCACT | 850 |
TCTTTACAAA GAAAGGAAAA CCTTCTTTGT CTTTTGATTT GGATAGGTGA | 900 |
>AT3G61970.1 longest ORF length:299
MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP | 50 |
LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD | 100 |
KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF | 150 |
PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR | 200 |
RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV | 250 |
SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR | 300 |
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