fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G62100 IAA30 indole-3-acetic acid inducible 30 (.1)

>AT3G62100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 494
EcoRV GAT|ATC 314
HindIII A|AGCTT 243
PvuII CAG|CTG 42
StyI C|C[AT][AT]GG 457


Click here to view TAIR data

>AT3G62100.1 length:519
ATGGGAAGAG GGAGAAGCTC ATCGTCTTCA TCGATAGAGA GCAGCTGCAA 
50
AAGCAACCCA TTTGGTGTGT CTTCGAGTAA TACTCGGAAC CTAAGCACGG 
100
ACCTGAGACT CGGGCTCAGC TTCGGATCAT CTTCCGGACA ATATTACAAC 
150
GGTGGAGATA ACCATGAATA TGATGGAGTC GGTGCGGCAG AGGAAATGAT 
200
GATCATGGAA GAAGAAGAGC AAAACGAGTG TAATAGTGTC GGAAGCTTCT 
250
ACGTGAAAGT GAACATGGAA GGAGTTCCTA TTGGGAGAAA GATCGATCTT 
300
TTATCTCTTA ATGGATATCA TGATTTGATC ACAACTCTCG ACTACATGTT 
350
CAATGCTTCA ATCCTTTGGG CTGAAGAAGA AGATATGTGT AGTGAGAAGA 
400
GTCACGTGCT AACGTACGCA GACAAAGAAG GTGACTGGAT GATGGTTGGA 
450
GATGTTCCTT GGGAGATGTT CTTGTCTAGC GTGAGAAGAC TAAAGATCTC 
500
AAGAGCTTAT CACTACTGA
550

>AT3G62100.1 longest ORF length:172
MGRGRSSSSS SIESSCKSNP FGVSSSNTRN LSTDLRLGLS FGSSSGQYYN 
50
GGDNHEYDGV GAAEEMMIME EEEQNECNSV GSFYVKVNME GVPIGRKIDL 
100
LSLNGYHDLI TTLDYMFNAS ILWAEEEDMC SEKSHVLTYA DKEGDWMMVG 
150
DVPWEMFLSS VRRLKISRAY HY
200