Locus |
Common name |
Short description |
AT3G62100 |
IAA30 |
indole-3-acetic acid inducible 30 (.1) |
>AT3G62100.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
494 |
EcoRV
| GAT|ATC |
314 |
HindIII
| A|AGCTT |
243 |
PvuII
| CAG|CTG |
42 |
StyI
| C|C[AT][AT]GG |
457 |
Click here to view TAIR data
>AT3G62100.1 length:519
ATGGGAAGAG GGAGAAGCTC ATCGTCTTCA TCGATAGAGA GCAGCTGCAA | 50 |
AAGCAACCCA TTTGGTGTGT CTTCGAGTAA TACTCGGAAC CTAAGCACGG | 100 |
ACCTGAGACT CGGGCTCAGC TTCGGATCAT CTTCCGGACA ATATTACAAC | 150 |
GGTGGAGATA ACCATGAATA TGATGGAGTC GGTGCGGCAG AGGAAATGAT | 200 |
GATCATGGAA GAAGAAGAGC AAAACGAGTG TAATAGTGTC GGAAGCTTCT | 250 |
ACGTGAAAGT GAACATGGAA GGAGTTCCTA TTGGGAGAAA GATCGATCTT | 300 |
TTATCTCTTA ATGGATATCA TGATTTGATC ACAACTCTCG ACTACATGTT | 350 |
CAATGCTTCA ATCCTTTGGG CTGAAGAAGA AGATATGTGT AGTGAGAAGA | 400 |
GTCACGTGCT AACGTACGCA GACAAAGAAG GTGACTGGAT GATGGTTGGA | 450 |
GATGTTCCTT GGGAGATGTT CTTGTCTAGC GTGAGAAGAC TAAAGATCTC | 500 |
AAGAGCTTAT CACTACTGA | 550 |
>AT3G62100.1 longest ORF length:172
MGRGRSSSSS SIESSCKSNP FGVSSSNTRN LSTDLRLGLS FGSSSGQYYN | 50 |
GGDNHEYDGV GAAEEMMIME EEEQNECNSV GSFYVKVNME GVPIGRKIDL | 100 |
LSLNGYHDLI TTLDYMFNAS ILWAEEEDMC SEKSHVLTYA DKEGDWMMVG | 150 |
DVPWEMFLSS VRRLKISRAY HY | 200 |
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