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| Locus | Common name | Short description |
| AT3G62240 | RING/U-box superfamily protein (.1) |
>AT3G62240.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 601 |
| EcoRV | GAT|ATC | 2154 |
| HindIII | A|AGCTT | 1188 |
| NcoI | C|CATGG | 1289 |
| NdeI | CA|TATG | 445, 483 |
| PstI | CTGCA|G | 1526 |
| SacI | GAGCT|C | 1998 |
| StyI | C|C[AT][AT]GG | 164, 223, 1289 |
| XbaI | T|CTAGA | 462 |
Click here to view TAIR data
>AT3G62240.1 length:2439
ATGGATGATA GCTGTGCCGT CTGCGCTGAC AATCTCGAAT GGGTTGCCTA | 50 |
TGGATCTTGT GGTCACCGAG AGGTTTGCTC CACATGCGTC GTTCGTCTCC | 100 |
GATTCGTCCT CGACGATCCT CGCTGCTGTA TCTGCAAGAC CGAGTCTCCT | 150 |
ATCGTTTTTG TCACCAAGGC ATTGGGTGAT TATACAAGGA CGATCAATGA | 200 |
TTTCTCCACC TTCCCATCAG CACCAAGGGA AGGTCGAGTA GGAGCTTTCT | 250 |
GGTATCATGA AGACACTCAG GCTTTCTTTG ATGACTTGGA TCAGTACAGG | 300 |
ATGATCAAAG CTATGTGTAG ACTTTCTTGC GGTGTTTGTG ATAAGACGGA | 350 |
AGATAAACCT AGAGAAGGAG GACCAAGACA TCATCGTCAG CGGATTAAGA | 400 |
GCGTCGAACA GTTGAAGGGT CATTTATATC ATAAGCACAA ATTGCATATG | 450 |
TGTGGTTTAT GTCTAGAAGG GCGAAAGATA TTCATATGTG AACAAAAGTT | 500 |
GTATACTAGG GCACAACTGA ACCAACACAT ACAGACTGGT GACTCTGAAG | 550 |
TTGATGGAAG TGAGAGTGAA AGGGGAGGCT TCGCAGGACA TCCTATGTGT | 600 |
GAATTCTGTA GGAATCCTTT CTATGGTGAT AATGAATTGT ATACTCACAT | 650 |
GTCTACAGAG CATTACACCT GTCATCTATG CCAAAGGTCA CAGCCAGGGC | 700 |
AATATGAATA TTACAAAAAC TATGATGACT TAGAGATTCA TTTCCGTAGA | 750 |
GACCATTTCC TCTGTGAAGA CGACTCCTGC CTTGCTAAGA AGTTCACAGT | 800 |
TTTCCAGAAT GAATCAGAGT TGAAAAGGCA TAACGCTATT GAGCATGGAG | 850 |
GTAAAATGTC TCGGTCTCAG CGAAGTGCTG CATTACAGAT ACCGACAAGT | 900 |
TTCCGATACA GTCGTGGAAA TGATCAAGAG AATCGTCGAG GAAGACCCCG | 950 |
ATCATTTCGT CGCGAGCCTG GTGATGAAGA ATATAATCTT GCAGTTCATG | 1000 |
CCGCTCTTCG TTTATCTGAG TCTGAGTATT CTCGGCAAGA GCCTGCTCCT | 1050 |
CCACCCTCAA GTGCACCACC CGGATTCTCT GAAAACAACA ACATACACGT | 1100 |
GGATGATACT GATCCCCTTA TTCAGCCAAT GGAATCTCTA TCAACTACAG | 1150 |
ATATGGAACC CTCTTCACGG TATCTTCAAG CTGTAGGAAG CTTTGGTGGT | 1200 |
GGTGGTTCAC GTCTTGGAGA ATCTGCTTTT CCTCCTCTTT CTGGGCAACA | 1250 |
GAGTTCTGGA CAGAACGTAG AGAGTTTACC AACTAACACC ATGGCTGCTC | 1300 |
GTCTAAGACG CCAAACAAAT CGAACTTCTA CTGCTTCCGC TATTGCTAGT | 1350 |
CCTTCTCAAG GATGGCCAGT GATTAATCGA GGCCCAGGAC AAGCATCTAT | 1400 |
TACAAGTGGA GGTAATCATT CTTCTTCAGG ATGGCCAGCT ATAGGTCGAA | 1450 |
CGCCTGTACA AGCCTCTAGT TCTTCAGTCC AATCTAGGTC CCATAACAGA | 1500 |
GTTTCACAAC CTCGACCTCT GGCTTCTGCA GTTCCACAGG CTGCTCGTAA | 1550 |
TGCAAATAGG ATTCCTCACT CTTCCTCAGC CCCTAATCTA TCTGATACAA | 1600 |
GATCACTTCA GCCTTCTCAT TCAGATTTTC CTCCAGTTTC TTCTGCTGTT | 1650 |
GTGCAAAATC GTAAAACATC ATCAACCACT ACACAGGGAT CGTCAAACAC | 1700 |
TCAACCCCCT CCAGATGTAC AATCTGCCAA CAAGTCATTG ATTGAGAAAA | 1750 |
TGCGATCTGC ACTTGGTCAT GATGAAGATG TATTCGTGGC CTTCAGGAAT | 1800 |
ATATCAGGAC AGTATCGTCA AGGTTCCATT GATGCAAAGA CTTATTTGGA | 1850 |
GTATGTGCAA GGTTATGGAT TGTCTCACTT GGTTATTGAT CTTGCTAGAC | 1900 |
TGTGTCCTGA CCCTAAGAGG CAGAAGGAAC TCATTGATAC CCATAATGCC | 1950 |
AGTTTGAGAG AAGAGGATTC AAAGGATAAT GGTCGGAGTG CTGCGCAGAG | 2000 |
CTCTTCTCAG CCTAAAGAGA GTCAAAGTTC AAAGAAAAAC AAAGGAAAAG | 2050 |
CTGTGAAAGT TGTTGACCCT AAAGAAACAC TAGCAGATAA CTTTATGGAC | 2100 |
ACAGTAAGGA GATTACAATC TTCTCAGAAT CCACAGGAAG AAGAAGAGGA | 2150 |
GGCGATATCA AAGGATAAGA ATACCTATAG ATCAGACAAA GGCAAATCAC | 2200 |
AAGTAGTAGG AACGGATTCT TCTTCCACAG GAAGCAAACA GCAACGTAAG | 2250 |
AAAACTTCTA AGTTTCACAG AGTACGGCTT GGAGATGGAT CAATGGCTGC | 2300 |
CTTGCTGGAT CTTAACAATT CTACTCGCGA GTCTGAACAA GAATCTAAGG | 2350 |
ATAGTAATTC CAACAGTAAC CAAAATCAGA CCGGTGGTTT ACCGGTTCGT | 2400 |
GGGGTTTGGC GTAAAGGAGG TGCTAACCTT TTCTCGTAA | 2450 |
>AT3G62240.1 longest ORF length:812
MDDSCAVCAD NLEWVAYGSC GHREVCSTCV VRLRFVLDDP RCCICKTESP | 50 |
IVFVTKALGD YTRTINDFST FPSAPREGRV GAFWYHEDTQ AFFDDLDQYR | 100 |
MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM | 150 |
CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC | 200 |
EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR | 250 |
DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS | 300 |
FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP | 350 |
PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG | 400 |
GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS | 450 |
PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR | 500 |
VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV | 550 |
VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN | 600 |
ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA | 650 |
SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD | 700 |
TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK | 750 |
KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR | 800 |
GVWRKGGANL FS | 850 |