fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G62850 zinc finger protein-related (.1)

>AT3G62850.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 297
HindIII A|AGCTT 1143
PstI CTGCA|G 1124
SacI GAGCT|C 883
XhoI C|TCGAG 600


Click here to view TAIR data

>AT3G62850.1 length:1419
ATGTATACGC CGGGAGCGGC GAAGCCTGAG TACGCGAGAG CTAAAATAGC 
50
TGTGTGGTGG GACATGAAGG ACTGTCCGAT TCCAGAGGGT TATGATGCTC 
100
GTCTGGTCCG TCCGAGCATA GAAGCGGCGT TCAATGAACT AGGCTACTCT 
150
GGTCCTATCT CCATCACCGG CTATGGTGAC CAAAGAGAAA CCCCTTGTCA 
200
GATCCTGCGA GGGCTCTCTT CCACCGGAGT CGCTGTAGCA CAAATCATAC 
250
CCGAAAGCAG ATGCTCACTC ATGTATTCGA GTATGCTGGA GTGGCGAGAT 
300
CTTAATCCTC CTCCGGCTAC AATGATGCTC GTATCCGATC AGTGGCAGCA 
350
TGTCTTCGCT TGGGATCTGT CCCGTCTACA ACAACACACG AAATACAACC 
400
TTTTTCTGGC TTATTCAACT GAGCCTTTCG CAGGTTCGGC ACTGAGACCT 
450
TGTGGAGAGT GGATCTGGAG AAATTTACTT GAGACCAAAA GGGAATTTGT 
500
TCAGGACAAG TGCAGCAGCA GTTGTGAGGT ATCTCCCATG TTTTATTGCA 
550
AATCTTGCTC TTACCAGGGC CAAAGCGTGG AGGGTTTCAG GAGGCATGTC 
600
TCGAGTGGAA AGCATGCAGT GAAAGAGGTT ACAAACCGTA TACATCCAGA 
650
ACTTGACTAT TTGACGAGGA CGTGGGCAAA GAACTACACT GCGAAGCCTG 
700
AGTACGCGAC AGCTCCAATA GTGGTGTGGT GGGACATGAA GGACTGTCCG 
750
ATTCCAGAGG GTTATGATGC TCGTCAGGTC CGTCCGAGTT TAGAAGGGGC 
800
GTTCAAGAAA CTAGGCTACT CTGGTCCTGT CTCCATCACC GGATGTGGCG 
850
ACCACAACAA AACCCCTGAT CACATCCTGC GAGAGCTCTC TTCCACTGGA 
900
GTCGATCTTG CACATTCCAT CGACGAAGTC ATATACAGTC GCATGTTTAT 
950
AAATATGAAG CAGTGGAAAG CTCGTAATCC TCCTCCGGCT ACAATCATGC 
1000
TCATATCCGA TGGTGTGGTG ATGATGTTCG AAAATTTAAT CGCCGACTTA 
1050
CTACAAGAGA CGAAGTACAA CCTTTTTCTG GCTTATTCGT ACAGGCCTTA 
1100
CAAAATGTCT GTCCTGCTCA CTTCTGCAGA GTGGCTTTGG AAAAGCTTAC 
1150
TTGTTGCAGG TGTTTTTTTC TCCTCTCCTT ATCATCATCA TCCACTAATG 
1200
ACTCTGTTTC TGAGCTATAT AATTACGCTC TCTGTTTCAG AGACAAGAAA 
1250
CCACGTTCTT CGCAAGTGCA GTCAAAGTCA AAGGGGTGAA CCGTCTACCA 
1300
AAATGTTTTC TTGCATGTTG TGTCTTTGTG ATTGCAAAAG CCTTGAAGAT 
1350
TTGAGGACGC ATCTCTCAAG TGAAGACCAT GCAGTGTGTG TAAGCATCCT 
1400
CCTCTGTATC ATCATTTGA
1450

>AT3G62850.1 longest ORF length:472
MYTPGAAKPE YARAKIAVWW DMKDCPIPEG YDARLVRPSI EAAFNELGYS 
50
GPISITGYGD QRETPCQILR GLSSTGVAVA QIIPESRCSL MYSSMLEWRD 
100
LNPPPATMML VSDQWQHVFA WDLSRLQQHT KYNLFLAYST EPFAGSALRP 
150
CGEWIWRNLL ETKREFVQDK CSSSCEVSPM FYCKSCSYQG QSVEGFRRHV 
200
SSGKHAVKEV TNRIHPELDY LTRTWAKNYT AKPEYATAPI VVWWDMKDCP 
250
IPEGYDARQV RPSLEGAFKK LGYSGPVSIT GCGDHNKTPD HILRELSSTG 
300
VDLAHSIDEV IYSRMFINMK QWKARNPPPA TIMLISDGVV MMFENLIADL 
350
LQETKYNLFL AYSYRPYKMS VLLTSAEWLW KSLLVAGVFF SSPYHHHPLM 
400
TLFLSYIITL SVSETRNHVL RKCSQSQRGE PSTKMFSCML CLCDCKSLED 
450
LRTHLSSEDH AVCVSILLCI II
500