Locus |
Common name |
Short description |
AT4G00120 |
IND1, GT140, bHLH040, IND, EDA33 |
INDEHISCENT, EMBRYO SAC DEVELOPMENT ARREST 33, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT4G00120.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
416 |
SacI
| GAGCT|C |
542 |
Click here to view TAIR data
>AT4G00120.1 length:597
ATGGAAAATG GTATGTATAA AAAGAAAGGA GTGTGCGACT CTTGTGTCTC | 50 |
GTCCAAAAGC AGATCCAACC ACAGCCCCAA AAGAAGCATG ATGGAGCCTC | 100 |
AGCCTCACCA TCTCCTCATG GATTGGAACA AAGCTAATGA TCTTCTCACA | 150 |
CAAGAACACG CAGCTTTTCT CAATGATCCT CACCATCTCA TGTTAGATCC | 200 |
ACCTCCCGAA ACCCTAATTC ACTTGGACGA AGACGAAGAG TACGATGAAG | 250 |
ACATGGATGC GATGAAGGAG ATGCAGTACA TGATCGCCGT CATGCAGCCC | 300 |
GTAGACATCG ACCCTGCCAC GGTCCCTAAG CCGAACCGCC GTAACGTAAG | 350 |
GATAAGCGAC GATCCTCAGA CGGTGGTTGC TCGTCGGCGT CGGGAAAGGA | 400 |
TCAGCGAGAA GATCCGAATT CTCAAGAGGA TCGTGCCTGG TGGTGCGAAG | 450 |
ATGGACACAG CTTCCATGCT CGACGAAGCC ATACGTTACA CCAAGTTCTT | 500 |
GAAACGGCAG GTGAGGATTC TTCAGCCTCA CTCTCAGATT GGAGCTCCTA | 550 |
TGGCTAACCC CTCTTACCTT TGTTATTACC ACAACTCCCA ACCCTGA | 600 |
>AT4G00120.1 longest ORF length:198
MENGMYKKKG VCDSCVSSKS RSNHSPKRSM MEPQPHHLLM DWNKANDLLT | 50 |
QEHAAFLNDP HHLMLDPPPE TLIHLDEDEE YDEDMDAMKE MQYMIAVMQP | 100 |
VDIDPATVPK PNRRNVRISD DPQTVVARRR RERISEKIRI LKRIVPGGAK | 150 |
MDTASMLDEA IRYTKFLKRQ VRILQPHSQI GAPMANPSYL CYYHNSQP | 200 |
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