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| Locus | Common name | Short description |
| AT4G00180 | YAB3 | YABBY3, Plant-specific transcription factor YABBY family protein (.1.2) |
>AT4G00180.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BamHI, BanI, BbsI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MseI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp509I, XbaI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AclI | AA|CGTT | 700 |
| AluI | AG|CT | 28, 34, 69, 89, 202, 346, 691 |
| AlwNI | CAGNNN|CTG | 93 |
| AvaII | G|G[AT]CC | 47, 65 |
| BalI | TGG|CCA | 234 |
| BanII | GPuGCPy|C | 203, 572 |
| BbvCI | CC|TCAGC | 27 |
| BfaI | C|TAG | 718 |
| BsaJI | C|CNNGG | 231, 421 |
| BsaWI | [AT]|CCGG[AT] | 45 |
| BsiHKAI | G[AT]GC[AT]|C | 203 |
| BslI | CCNNNNN|NNGG | 182, 568, 703 |
| Bsp1286I | G[GAT]GC[CAT]|C | 203, 572 |
| BsrI | ACTGGN| | 569 |
| BstAPI | GCANNNN|NTGC | 94 |
| BstBI | TT|CGAA | 171 |
| BstEII | G|GTNACC | 187 |
| BstF5I | GGATGNN| | 658 |
| BstYI | Pu|GATCPy | 500 |
| Cac8I | GCN|NGC | 517 |
| DdeI | C|TNAG | 26 |
| DpnI | GA-CH3|TC | 393, 401, 499 |
| DpnII | |GATC | 393, 401, 499 |
| EaeI | Py|GGCCPu | 162, 234, 424 |
| EcoRV | GAT|ATC | 529 |
| Fnu4HI | GC|NGC | 88, 160, 555, 693 |
| HaeIII | GG|CC | 161, 233, 423, 709 |
| HhaI | GCG|C | 637 |
| HinP1I | G|CGC | 637 |
| HinfI | G|ANTC | 380, 484, 598 |
| HpaII | C|CGG | 44 |
| Hpy188I | TCN|GA | 125, 154 |
| HpyCH4III | ACN|GT | 102, 144, 150, 166, 189, 685 |
| HpyCH4IV | A|CGT | 78, 505, 633, 699 |
| HpyCH4V | TG|CA | 86, 472 |
| MboI | |GATC | 393, 401, 499 |
| MscI | TGG|CCA | 234 |
| MslI | CAPyNN|NNPuTG | 13, 322 |
| MspA1I | C[AC]G|C[GT]G | 692 |
| MspI | C|CGG | 44 |
| MwoI | GCNNNNN|NNGC | 94, 552 |
| NlaIII | CATG| | 7, 13, 196, 316, 322, 601 |
| NspI | PuCATG|Py | 8 |
| PflFI | GACN|NNGTC | 103 |
| PflMI | CCANNNN|NTGG | 568 |
| PvuII | CAG|CTG | 692 |
| RsaI | GT|AC | 464 |
| SacI | GAGCT|C | 203 |
| Sau3AI | |GATC | 393, 401, 499 |
| Sau96I | G|GNCC | 47, 65, 710 |
| StyI | C|C[AT][AT]GG | 231 |
| Taqƒ¿I | T|CGA | 2, 170 |
| TfiI | G|A[AT]TC | 484 |
| TseI | G|C[AT]GC | 88, 555, 693 |
| Tsp45I | |GT[CG]AC | 147, 186 |
| TspRI | NNCA[CG]TGNN| | 103, 167, 399, 553 |
| Tth111I | GACN|NNGTC | 103 |
| XcmI | CCANNNNN|NNNNTGG | 707 |
Click here to view TAIR data
>AT4G00180.1 length:723
ATGTCGAGCA TGTCCATGTC GTCCTCCTCA GCTCCAGCTT TTCCACCGGA | 50 |
CCACTTCTCA TCTACGGACC AGCTCTGTTA CGTCCATTGC AGCTTCTGCG | 100 |
ACACTGTCCT TGCTGTGAGT GTTCCTCCGA GTAGTTTGTT CAAGACGGTG | 150 |
ACGGTCAGAT GCGGCCACTG TTCGAACCTT TTGTCGGTGA CCGTGAGCAT | 200 |
GAGAGCTCTT CTTCTTCCAT CCGTTTCCAA CCTTGGCCAT TCCTTTTTAC | 250 |
CTCCCCCTCC TCCTCCTCCT CCTCCAAATC TTTTGGAGGA AATGCGAAGC | 300 |
GGAGGGCAGA ATATAAACAT GAACATGATG ATGAGCCATC ACGCTTCAGC | 350 |
TCACCACCCG AACGAGCATT TGGTTATGGC GACTCGCAAC GGAAGATCAG | 400 |
TGGATCATCT ACAAGAGATG CCTCGGCCAC CACCAGCCAA TAGACCCCCA | 450 |
GAGAAGCGAC AAAGAGTACC ATCTGCATAC AACCGATTCA TCAAAGAGGA | 500 |
GATCCAACGT ATAAAGGCAG GCAACCCTGA TATCAGCCAC AGAGAAGCCT | 550 |
TCAGTGCTGC TGCCAAAAAC TGGGCTCATT TCCCTCACAT ACACTTTGGA | 600 |
CTCATGGCTG ACCATCCTCC CACGAAGAAG GCTAACGTGC GCCAACAGGA | 650 |
AGGAGAGGAT GGGATGATGG GAAGAGAAGG GTTTTACGGT TCAGCTGCCA | 700 |
ACGTTGGGGT GGCCCATAAC TAG | 750 |
>AT4G00180.1 longest ORF length:240
MSSMSMSSSS APAFPPDHFS STDQLCYVHC SFCDTVLAVS VPPSSLFKTV | 50 |
TVRCGHCSNL LSVTVSMRAL LLPSVSNLGH SFLPPPPPPP PPNLLEEMRS | 100 |
GGQNINMNMM MSHHASAHHP NEHLVMATRN GRSVDHLQEM PRPPPANRPP | 150 |
EKRQRVPSAY NRFIKEEIQR IKAGNPDISH REAFSAAAKN WAHFPHIHFG | 200 |
LMADHPPTKK ANVRQQEGED GMMGREGFYG SAANVGVAHN | 250 |