Locus |
Common name |
Short description |
AT4G00180 |
YAB3 |
YABBY3, Plant-specific transcription factor YABBY family protein (.1.2) |
>AT4G00180.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
529 |
PvuII
| CAG|CTG |
692 |
SacI
| GAGCT|C |
203 |
StyI
| C|C[AT][AT]GG |
231 |
Click here to view TAIR data
>AT4G00180.1 length:723
ATGTCGAGCA TGTCCATGTC GTCCTCCTCA GCTCCAGCTT TTCCACCGGA | 50 |
CCACTTCTCA TCTACGGACC AGCTCTGTTA CGTCCATTGC AGCTTCTGCG | 100 |
ACACTGTCCT TGCTGTGAGT GTTCCTCCGA GTAGTTTGTT CAAGACGGTG | 150 |
ACGGTCAGAT GCGGCCACTG TTCGAACCTT TTGTCGGTGA CCGTGAGCAT | 200 |
GAGAGCTCTT CTTCTTCCAT CCGTTTCCAA CCTTGGCCAT TCCTTTTTAC | 250 |
CTCCCCCTCC TCCTCCTCCT CCTCCAAATC TTTTGGAGGA AATGCGAAGC | 300 |
GGAGGGCAGA ATATAAACAT GAACATGATG ATGAGCCATC ACGCTTCAGC | 350 |
TCACCACCCG AACGAGCATT TGGTTATGGC GACTCGCAAC GGAAGATCAG | 400 |
TGGATCATCT ACAAGAGATG CCTCGGCCAC CACCAGCCAA TAGACCCCCA | 450 |
GAGAAGCGAC AAAGAGTACC ATCTGCATAC AACCGATTCA TCAAAGAGGA | 500 |
GATCCAACGT ATAAAGGCAG GCAACCCTGA TATCAGCCAC AGAGAAGCCT | 550 |
TCAGTGCTGC TGCCAAAAAC TGGGCTCATT TCCCTCACAT ACACTTTGGA | 600 |
CTCATGGCTG ACCATCCTCC CACGAAGAAG GCTAACGTGC GCCAACAGGA | 650 |
AGGAGAGGAT GGGATGATGG GAAGAGAAGG GTTTTACGGT TCAGCTGCCA | 700 |
ACGTTGGGGT GGCCCATAAC TAG | 750 |
>AT4G00180.1 longest ORF length:240
MSSMSMSSSS APAFPPDHFS STDQLCYVHC SFCDTVLAVS VPPSSLFKTV | 50 |
TVRCGHCSNL LSVTVSMRAL LLPSVSNLGH SFLPPPPPPP PPNLLEEMRS | 100 |
GGQNINMNMM MSHHASAHHP NEHLVMATRN GRSVDHLQEM PRPPPANRPP | 150 |
EKRQRVPSAY NRFIKEEIQR IKAGNPDISH REAFSAAAKN WAHFPHIHFG | 200 |
LMADHPPTKK ANVRQQEGED GMMGREGFYG SAANVGVAHN | 250 |
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