fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00238 DNA-binding storekeeper protein-related transcriptional regulator (.1)

>AT4G00238.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 62, 446
EcoRV GAT|ATC 526
HindIII A|AGCTT 546, 588, 949
NheI G|CTAGC 343
StyI C|C[AT][AT]GG 499


Click here to view TAIR data

>AT4G00238.1 length:1038
ATGGCTTCTT TGGAAAATCC AGCAATCGAT TCTTCAAGCG AATTTGAGAG 
50
TTCTTCTGAA GAGATCTCTT CTTCTAAAGA AAGCAAACCC AAAGAAGCTC 
100
CCGTCACTGT TCCGTCAACA AAAACCCTAA ACTCTCCTTC CGCCGCCGTG 
150
GCAGTTTCTG ATGACTCAGA GTCAGAGAAG CAGTCATTCG TCTTAACCAG 
200
GCGGAAGAAG AAAGAAGGTG CTGCTGAATC ACCGGCAGTG AAGTCAGGGA 
250
AGAAAGAAGG TGCTGCTGAA TCACCGGCAG TGAAGTCAGG GAATAACGAA 
300
GGTGCTACTG AATCACCGGC GGTGAAGTCA GGGAAGAAGC GAGCTAGCGA 
350
AGGAACCACG TCAAGGGACA TGCATGTCAA AAGAATTAAG AAAGAGGGCG 
400
ATAACAAAAA GGGGCATGCT CAGAGAGTAT GGAGTGAAGA AGACGAGATC 
450
TCTCTCCTGC AAGCAATGAT CGATTTCAAA GCTGAGACAG GTACAAGTCC 
500
TTGGGATCAT AAGGATAGGT TTTTTGATAT CGCCAAGAAA TCTATAAGCT 
550
TTGATGTTAG TAAAGTCCAG TTCTTTGACA AGATTAGAAG CTTTAAGAGA 
600
AAGTATTTTG GTGACCGGAA GGTGAGAAGT GTTGAATCGG ATCATGATAA 
650
GAAGTGTTTG GGTTTGGCTG TTTCTTTTTG GGGATCTGAT GGTGTGAGCC 
700
TTGAAACTCC TGTGAAGAAG AAAGTGAAAG ATGAATCTGT TCTTGTTAAG 
750
GCTAATAGCA AGGAGAAGAA CGTGAAACCT TTGGTTAAAG AAGATGAGCA 
800
AGTCGTGATT CTTGGAGAAG ATTCGGAGTG GTTTGAGGAG TCTTTTCTTG 
850
TTCCGGTTAT CGCTAGTCTC GGTTTGGATG AGTATTCTGT GAAGAAGAAG 
900
TGGAGCAAGG TGTCCGTGGA GACTAAGAAG AGGATTCAAG AGAAGATGAA 
950
GCTTGTGGAT GCTAAGAAAT GTGAGTTGTT GTTGGCGAAC ATGGATGTTT 
1000
TGAAGGAGGT GACTTCAGTG CTTACTCAAA CCAACTAA
1050

>AT4G00238.1 longest ORF length:345
MASLENPAID SSSEFESSSE EISSSKESKP KEAPVTVPST KTLNSPSAAV 
50
AVSDDSESEK QSFVLTRRKK KEGAAESPAV KSGKKEGAAE SPAVKSGNNE 
100
GATESPAVKS GKKRASEGTT SRDMHVKRIK KEGDNKKGHA QRVWSEEDEI 
150
SLLQAMIDFK AETGTSPWDH KDRFFDIAKK SISFDVSKVQ FFDKIRSFKR 
200
KYFGDRKVRS VESDHDKKCL GLAVSFWGSD GVSLETPVKK KVKDESVLVK 
250
ANSKEKNVKP LVKEDEQVVI LGEDSEWFEE SFLVPVIASL GLDEYSVKKK 
300
WSKVSVETKK RIQEKMKLVD AKKCELLLAN MDVLKEVTSV LTQTN
350