fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00260 MEE45 maternal effect embryo arrest 45, Transcriptional factor B3 family protein (.1)

>AT4G00260.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 1404
StyI C|C[AT][AT]GG 457, 1562


Click here to view TAIR data

>AT4G00260.1 length:1587
ATGGCGCATC AACATTTCTT CAAGCCTCTT CTTCCTGGCT TCCACGCCTC 
50
CTTGACAATT CCTGTAGCCT TCTTCTTGAA GTATATAGAA GGAAGATATG 
100
AGCAGAAGAC GGCGAAGCTG AGATCAGACG CGTCAAAGAG AACTTGGGAA 
150
GTGAAGATAG ATGGCCAGAG ACTCACCGAC GGTTGGAAAG AGTTTGCTGT 
200
CTCACATGAT CTTCGAATCG GTGACATTGT TGTTTTCAGA CAAGAGAGTG 
250
ACTTGGCTTT CCATGTAACA CTGTTGGGAC CTAGTTGTTG TGGGATTCAA 
300
TATGGTTCGT GTTCAGTCGA AAAGAACAAC CTCGGTGACG AGAAAAAGAA 
350
AGTGAAGGAG AATCCAAATG GAGAAGCAGA GTCTTCTTCA CGAGATCCCT 
400
CTTGTTTTGT GGCTAATGTT GCGCCTTCGA GTCTACGTTA TGACTTGATG 
450
AGATTTCCAA GGGGTTTTGT GAGGGATAAT GGTGTAGTCG GATCTGGAGA 
500
GATTGTTCTG ATGAATGAAA AGGGCAGATC ATGGAATTTT AACTTGAGAC 
550
AAAAGCCATC AAACGGAACA GTTTATGTTA GAGGAGGGTG GGTGAGTTTT 
600
TGTGATGCCA ATGGGCTTAA AGCTGGAGAT AACTACACTT TCAAACTGAT 
650
CAAAAGAGCA GGAACTCTTG TTCTACGTTT GTTACCCAAT GAGCCAAAAG 
700
AGGAAGCTAA TGAAGTGTCT CTTCCCGAAG AACCGGAAAG CGATGCAGAG 
750
CGCAACCTTG AAAAGATTCA AAGGAAGGAG AAAGTGAAGA AGAATGTAAC 
800
AAGAGAGGCA GAGTCTTCTT CACAAGATCC CTCTTGTTTT GTGGCTAATG 
850
TCTCCCCTTC GAGTCTACGC TATGACACAC TGTATCTTCC AAAGCGTTTT 
900
ATGAGGGAAA ATGGTGTAGA CAAAAGATGT GGAGAGATGA TTCTGATTAA 
950
TGAAAAGGGA AAATCATGGA CTTTAGATTT GAAAGTAAAG AAATCATCCG 
1000
GAACTTCTCT CATCAAACGA GGATGGAGAA GTTTCTGTAG TGCCAATGGA 
1050
CTAAGAGCTG GAAGTATCAT AACTCTCAAA CTGATAAAGA AAAGAGCAAC 
1100
TCTTGTTCTA CGTTTGATCC CCAACGAGCC AGAAGAAGCT AATGAAGTAG 
1150
TCTCTCTTTC GACAGAGCAA GAAAGCGATG AAGAGAGTAT CCACGACGAG 
1200
AAAATCTCAA GAAGAAAGTC TTTACTATCC GAAAACCGAT TTGTGACATT 
1250
AACTCTAACA CCTTATACAA TCCAAAGTTC TCTACTGAAT GAGAATCTTT 
1300
TGTGTGAATC TATGTTTCAG CGTCTTCCGG TTCCTTTCAC GAGGATGAAT 
1350
GGTATCAATG AAGAAACTAA AATGACTCTG TTGGATAAAC ATGGTGTGAA 
1400
GTGGTTAACG ACTCTGCGGT TCGAGGACGA CAAAAGAAAA AGACTACGAA 
1450
TGGTAGGAGG ATGGCAAGGA TTCATCCAAG CTAACGATGT GAAGGCAAAC 
1500
GAATCCATCA TGTTGGAACT GATTTGGGAA GAAGAAACAA GTTGCGTCCT 
1550
TAAGTTCTGC TCCAAGGTGA AGCTAGAAAT CAAATGA
1600

>AT4G00260.1 longest ORF length:528
MAHQHFFKPL LPGFHASLTI PVAFFLKYIE GRYEQKTAKL RSDASKRTWE 
50
VKIDGQRLTD GWKEFAVSHD LRIGDIVVFR QESDLAFHVT LLGPSCCGIQ 
100
YGSCSVEKNN LGDEKKKVKE NPNGEAESSS RDPSCFVANV APSSLRYDLM 
150
RFPRGFVRDN GVVGSGEIVL MNEKGRSWNF NLRQKPSNGT VYVRGGWVSF 
200
CDANGLKAGD NYTFKLIKRA GTLVLRLLPN EPKEEANEVS LPEEPESDAE 
250
RNLEKIQRKE KVKKNVTREA ESSSQDPSCF VANVSPSSLR YDTLYLPKRF 
300
MRENGVDKRC GEMILINEKG KSWTLDLKVK KSSGTSLIKR GWRSFCSANG 
350
LRAGSIITLK LIKKRATLVL RLIPNEPEEA NEVVSLSTEQ ESDEESIHDE 
400
KISRRKSLLS ENRFVTLTLT PYTIQSSLLN ENLLCESMFQ RLPVPFTRMN 
450
GINEETKMTL LDKHGVKWLT TLRFEDDKRK RLRMVGGWQG FIQANDVKAN 
500
ESIMLELIWE EETSCVLKFC SKVKLEIK
550