fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00390 DNA-binding storekeeper protein-related transcriptional regulator (.1)

>AT4G00390.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 282, 298
HindIII A|AGCTT 710, 817
SalI G|TCGAC 345
StyI C|C[AT][AT]GG 682


Click here to view TAIR data

>AT4G00390.1 length:1095
ATGACGAAGA AACTCGATCC ACCAACGGCA CCTTCAAGCG ACGAAGATGA 
50
CGTCGAGACT TCCGAAGATG ATTCCTCTTC ATCTGAAGAA GACGAACCAA 
100
TCAAATCCCT TCCCGCCACA ACCGCCGCTG CTCCTGCTAA ATCCACCGCC 
150
GTCTCCGCCG CTACTCCAGC TAAATCCACC TCCGTCTCCG CCGCTGCTCC 
200
TTCTAAATCC ACCGCCGTCT CCGCCGCTGC TGATTCCGAT TCTGGTTCGG 
250
AGAGTGAAAC AGATTCGGAT TCTGAATCGA CGGATCCTCC GAAATCTGGA 
300
TCCGGTAAAA CAATCGCTTC AAAGAAGAAA GATGATCCGT CGTCGTCGAC 
350
TGCTACTTTA GCTTTACCGG CGGTGAAATC TGGAGCAAAG AGGGCAGCGA 
400
GTGAAGCTGC GACGACTTCA ACGAAACGAG TCAAGAAAGA TGAAGAGAGT 
450
GTAAAGAAGC CAGCACTTTT TCAAAGACTA TGGAGTGACG ATGACGAAAT 
500
CTCTATGTTA CAAGGAATGA TAGATTATCA TGCTGATACA GGGAAGTCTC 
550
CTTCCGCAGA TACTAATGCG TTTTACGAGT TCCAGAAGAA ATCTATCAGC 
600
TTTGAGGTTA GTAAGAGTCA ATTCTCGGAT AAGGTTAGGA GTTTAAGGAA 
650
GAAGTACCGT GCTAAAGAAG GAAAGGACGA ACCTAGGTTT GTGAAAGCTC 
700
ATGATAAGAA AGCTTTTGAA TTGTCAAAGT TTATTTGGGG ACCTAAAGGA 
750
ATAGCTCTTG ATTCTAATGC TAAGTCCAAC GGTGTGTCGA AAAAGAGTGC 
800
GAGTAAGACG AAGGAGAAGC TTGATTCTGT AAAGCAAGAC TTGGCGTTTG 
850
TTGGTGTTTC TTCAACTAAT GGAGATGATT GGTTTGAGAA GTCGTCTCTT 
900
GCTAGGATGA TTGCTGGTTC GGGTATTGAT GAGTATTATG TGAGGCAGAA 
950
ATGGAGTTCG TTTACTCTTG AGACTAAGAA GATTGTTGAA GAGAAGTTTC 
1000
AGTTGATGCA AGCTAAAGAG CTTGAGGCTA TGTTGGATAA GAGTGTGCGT 
1050
TTGACTGACC TTACGTCTTA CTTCGTTGAT GCTTCGAAGA ACTAG
1100

>AT4G00390.1 longest ORF length:364
MTKKLDPPTA PSSDEDDVET SEDDSSSSEE DEPIKSLPAT TAAAPAKSTA 
50
VSAATPAKST SVSAAAPSKS TAVSAAADSD SGSESETDSD SESTDPPKSG 
100
SGKTIASKKK DDPSSSTATL ALPAVKSGAK RAASEAATTS TKRVKKDEES 
150
VKKPALFQRL WSDDDEISML QGMIDYHADT GKSPSADTNA FYEFQKKSIS 
200
FEVSKSQFSD KVRSLRKKYR AKEGKDEPRF VKAHDKKAFE LSKFIWGPKG 
250
IALDSNAKSN GVSKKSASKT KEKLDSVKQD LAFVGVSSTN GDDWFEKSSL 
300
ARMIAGSGID EYYVRQKWSS FTLETKKIVE EKFQLMQAKE LEAMLDKSVR 
350
LTDLTSYFVD ASKN
400