fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00540 MYB3R-2, PC-MYB2, ATMYB3R2 C-MYB-LIKE TRANSCRIPTION FACTOR 3R-2, myb domain protein 3r2 (.1.2)

>AT4G00540.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 376, 472
StyI C|C[AT][AT]GG 186, 376, 472, 1172


Click here to view TAIR data

>AT4G00540.1 length:1314
ATGACAGAGT CTATTGATTT AAATCGATCA GAGTCCGAGT CTGATAACAA 
50
CACCGACGAC GTTACTCCTA TTTTTGCAAT TGATGACTCT TCAAAAGGAA 
100
GAGTGAGTGG TCCTACTAGA AGATCAACTA AAGGAGGATG GACAGCCGAA 
150
GAGGACCAAA TTTTGACGAA TGTTGTGAAG AAGTACCAAG GGAGGAACTG 
200
GAAAAGGATT GCTGAATGCC TTCCTGGGTC GGAAGAGAAT AGGAGGAATG 
250
ATGTCCAATG TCAGCACCGT TGGCTTAAGG TTCTTGATCC AAGCCTCCAA 
300
AAAGGAGCTT GGAAAAAAGA GGAAGATGAA CTCTTAAGTG AGTTGGTTAA 
350
AGATTATATG GAGAATGATA GGCCTCCATG GTCAAAAATT TCAAAGGAAC 
400
TCCCTGGTCG CATCGGCAAG CAATGCCGCG AAAGGTGGCA TAATCATTTG 
450
AATCCGACTA TTATAAAATC TCCATGGACT AGAGAAGAGG AATTAATTCT 
500
CGTTCAAGCA CAAAGAGGAA ACGGCAACAA ATGGGCAGAG ATTGCCAAGC 
550
TATTGCCTGG AAGGACGGAG AATAATATTA AGAACCATTG GAATTGTTCA 
600
GTTAAGAAAA GGCTAGAGCA GTTTCCTAGT AACCTCTTCT CTGGTGTGGT 
650
CTATGGTTCT AAACCTAGTT CTGGTTTTGA ATACAACTTT TTCAATCAAA 
700
GAAACACGAT GGTCGAGAGT TGCATAACAT CACAAATCAA GGAAGCTGCA 
750
AAGAGTCCTC AAAGGGATTT CTTGGATTTA ACTTTAGGAC TGAATTGGAG 
800
GAGCATTTCT TCATCCACAA GCTCTCTTAG AGGAGAAGAA TCAGTCTCAT 
850
CATCAGTAGA CTCAGTTTGT GCAAGACTCA ATGCGTGTTT AGAAACTCCA 
900
CAGAACAGCA ACAACGATAC TGTGTGCGTA AAGGAAGTGA GGGAGATGAA 
950
AGAGAGACTT AGAATGGCTG CGAGGACTTT CGACACACCC TCCATTATCT 
1000
CCAAAACAAG CTCACCAGCT TCAGGTTTGA AACGGCTCAG ACAAAAATAC 
1050
GATACACCGT TTCCAACAGA TGCTCGAAGT CACATGTCAA GTGAGGAAGA 
1100
TCACTCAGTT TCAGCTTCTC CTTCATCCAA ATACAGATTT GTGAAACGCA 
1150
ACACCTGCTC TGGCTCAAAA CCCTTGGAGA GGCGTTTAGA TTTTGACTTT 
1200
CTATTGTGGG ACGAACATGG TCGAAGAAAC GGGATTGTCA ATTTCTCTGT 
1250
TAGGATTCTG CCCCAAAAAT CTGATCTTAA ATCCGGTCTT GTGCGTCCGT 
1300
TTTGGTTACG TTAG
1350

>AT4G00540.1 longest ORF length:437
MTESIDLNRS ESESDNNTDD VTPIFAIDDS SKGRVSGPTR RSTKGGWTAE 
50
EDQILTNVVK KYQGRNWKRI AECLPGSEEN RRNDVQCQHR WLKVLDPSLQ 
100
KGAWKKEEDE LLSELVKDYM ENDRPPWSKI SKELPGRIGK QCRERWHNHL 
150
NPTIIKSPWT REEELILVQA QRGNGNKWAE IAKLLPGRTE NNIKNHWNCS 
200
VKKRLEQFPS NLFSGVVYGS KPSSGFEYNF FNQRNTMVES CITSQIKEAA 
250
KSPQRDFLDL TLGLNWRSIS SSTSSLRGEE SVSSSVDSVC ARLNACLETP 
300
QNSNNDTVCV KEVREMKERL RMAARTFDTP SIISKTSSPA SGLKRLRQKY 
350
DTPFPTDARS HMSSEEDHSV SASPSSKYRF VKRNTCSGSK PLERRLDFDF 
400
LLWDEHGRRN GIVNFSVRIL PQKSDLKSGL VRPFWLR
450