Locus |
Common name |
Short description |
AT4G00540 |
MYB3R-2, PC-MYB2, ATMYB3R2 |
C-MYB-LIKE TRANSCRIPTION FACTOR 3R-2, myb domain protein 3r2 (.1.2) |
>AT4G00540.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
382, 478 |
StyI
| C|C[AT][AT]GG |
192, 382, 478, 1184 |
Click here to view TAIR data
>AT4G00540.2 length:1218
ATGACAGAGT CTATTGATTT AAATCGATCA GAGTCCGAGT CTGATAACAA | 50 |
CACCGACGAC GTTACTCCTA TTTTTGCAAT TGATGACTCT TCAAAAGGAT | 100 |
ACAGAAGAGT GAGTGGTCCT ACTAGAAGAT CAACTAAAGG AGGATGGACA | 150 |
GCCGAAGAGG ACCAAATTTT GACGAATGTT GTGAAGAAGT ACCAAGGGAG | 200 |
GAACTGGAAA AGGATTGCTG AATGCCTTCC TGGGTCGGAA GAGAATAGGA | 250 |
GGAATGATGT CCAATGTCAG CACCGTTGGC TTAAGGTTCT TGATCCAAGC | 300 |
CTCCAAAAAG GAGCTTGGAA AAAAGAGGAA GATGAACTCT TAAGTGAGTT | 350 |
GGTTAAAGAT TATATGGAGA ATGATAGGCC TCCATGGTCA AAAATTTCAA | 400 |
AGGAACTCCC TGGTCGCATC GGCAAGCAAT GCCGCGAAAG GTGGCATAAT | 450 |
CATTTGAATC CGACTATTAT AAAATCTCCA TGGACTAGAG AAGAGGAATT | 500 |
AATTCTCGTT CAAGCACAAA GAGGAAACGG CAACAAATGG GCAGAGATTG | 550 |
CCAAGCTATT GCCTGGAAGG ACGGAGAATA ATATTAAGAA CCATTGGAAT | 600 |
TGTTCAGTTA AGAAAAGGCT AGAGCAGTTT CCTAGTAACC TCTTCTCTGG | 650 |
TGTGGTCTAT GGTTCTAAAC CTAGTTCTGG TTTTGAATAC AACTTTTTCA | 700 |
ATCAAAGAAA CACGATGGTC GAGAGTTGCA TAACATCACA AATCAAGGAA | 750 |
GCTGCAAAGA GTCCTCAAAG GGATTTCTTG GATTTAACTT TAGGACTGAA | 800 |
TTGGAGGAGC ATTTCTTCAT CCACAAGCTC TCTTAGAGGA GAAGAATCAG | 850 |
TCTCATCATC AGTAGACTCA GTTTGTGCAA GACTCAATGT TTCAGCGTGT | 900 |
TTAGAAACTC CACAGAACAG CAACAACGAT ACTGTGTGCG TAAAGGAAGT | 950 |
GAGGGAGATG AAAGAGAGAC TTAGAATGGC TGCGAGGACT TTCGACACAC | 1000 |
CCTCCATTAT CTCCAAAACA AGCTCACCAG CTTCAGGTTT GAAACGGCTC | 1050 |
AGACAAAAAT ACGATACACC GTTTCCAACA GATGCTCGAA GTCACATGTC | 1100 |
AAGTGAGGAA GATCACTCAG TTTCAGCTTC TCCTTCATCC AAATACAGAT | 1150 |
TTGTGAAACG CAACACCTGC TCTGGCTCAA AACCCTTGGA GAGGCGTTTA | 1200 |
GATTTTGACT TTCTGTGA | 1250 |
>AT4G00540.2 longest ORF length:405
MTESIDLNRS ESESDNNTDD VTPIFAIDDS SKGYRRVSGP TRRSTKGGWT | 50 |
AEEDQILTNV VKKYQGRNWK RIAECLPGSE ENRRNDVQCQ HRWLKVLDPS | 100 |
LQKGAWKKEE DELLSELVKD YMENDRPPWS KISKELPGRI GKQCRERWHN | 150 |
HLNPTIIKSP WTREEELILV QAQRGNGNKW AEIAKLLPGR TENNIKNHWN | 200 |
CSVKKRLEQF PSNLFSGVVY GSKPSSGFEY NFFNQRNTMV ESCITSQIKE | 250 |
AAKSPQRDFL DLTLGLNWRS ISSSTSSLRG EESVSSSVDS VCARLNVSAC | 300 |
LETPQNSNND TVCVKEVREM KERLRMAART FDTPSIISKT SSPASGLKRL | 350 |
RQKYDTPFPT DARSHMSSEE DHSVSASPSS KYRFVKRNTC SGSKPLERRL | 400 |
DFDFL | 450 |
|