fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00540 MYB3R-2, PC-MYB2, ATMYB3R2 C-MYB-LIKE TRANSCRIPTION FACTOR 3R-2, myb domain protein 3r2 (.1.2)

>AT4G00540.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 382, 478
StyI C|C[AT][AT]GG 192, 382, 478, 1184


Click here to view TAIR data

>AT4G00540.2 length:1218
ATGACAGAGT CTATTGATTT AAATCGATCA GAGTCCGAGT CTGATAACAA 
50
CACCGACGAC GTTACTCCTA TTTTTGCAAT TGATGACTCT TCAAAAGGAT 
100
ACAGAAGAGT GAGTGGTCCT ACTAGAAGAT CAACTAAAGG AGGATGGACA 
150
GCCGAAGAGG ACCAAATTTT GACGAATGTT GTGAAGAAGT ACCAAGGGAG 
200
GAACTGGAAA AGGATTGCTG AATGCCTTCC TGGGTCGGAA GAGAATAGGA 
250
GGAATGATGT CCAATGTCAG CACCGTTGGC TTAAGGTTCT TGATCCAAGC 
300
CTCCAAAAAG GAGCTTGGAA AAAAGAGGAA GATGAACTCT TAAGTGAGTT 
350
GGTTAAAGAT TATATGGAGA ATGATAGGCC TCCATGGTCA AAAATTTCAA 
400
AGGAACTCCC TGGTCGCATC GGCAAGCAAT GCCGCGAAAG GTGGCATAAT 
450
CATTTGAATC CGACTATTAT AAAATCTCCA TGGACTAGAG AAGAGGAATT 
500
AATTCTCGTT CAAGCACAAA GAGGAAACGG CAACAAATGG GCAGAGATTG 
550
CCAAGCTATT GCCTGGAAGG ACGGAGAATA ATATTAAGAA CCATTGGAAT 
600
TGTTCAGTTA AGAAAAGGCT AGAGCAGTTT CCTAGTAACC TCTTCTCTGG 
650
TGTGGTCTAT GGTTCTAAAC CTAGTTCTGG TTTTGAATAC AACTTTTTCA 
700
ATCAAAGAAA CACGATGGTC GAGAGTTGCA TAACATCACA AATCAAGGAA 
750
GCTGCAAAGA GTCCTCAAAG GGATTTCTTG GATTTAACTT TAGGACTGAA 
800
TTGGAGGAGC ATTTCTTCAT CCACAAGCTC TCTTAGAGGA GAAGAATCAG 
850
TCTCATCATC AGTAGACTCA GTTTGTGCAA GACTCAATGT TTCAGCGTGT 
900
TTAGAAACTC CACAGAACAG CAACAACGAT ACTGTGTGCG TAAAGGAAGT 
950
GAGGGAGATG AAAGAGAGAC TTAGAATGGC TGCGAGGACT TTCGACACAC 
1000
CCTCCATTAT CTCCAAAACA AGCTCACCAG CTTCAGGTTT GAAACGGCTC 
1050
AGACAAAAAT ACGATACACC GTTTCCAACA GATGCTCGAA GTCACATGTC 
1100
AAGTGAGGAA GATCACTCAG TTTCAGCTTC TCCTTCATCC AAATACAGAT 
1150
TTGTGAAACG CAACACCTGC TCTGGCTCAA AACCCTTGGA GAGGCGTTTA 
1200
GATTTTGACT TTCTGTGA
1250

>AT4G00540.2 longest ORF length:405
MTESIDLNRS ESESDNNTDD VTPIFAIDDS SKGYRRVSGP TRRSTKGGWT 
50
AEEDQILTNV VKKYQGRNWK RIAECLPGSE ENRRNDVQCQ HRWLKVLDPS 
100
LQKGAWKKEE DELLSELVKD YMENDRPPWS KISKELPGRI GKQCRERWHN 
150
HLNPTIIKSP WTREEELILV QAQRGNGNKW AEIAKLLPGR TENNIKNHWN 
200
CSVKKRLEQF PSNLFSGVVY GSKPSSGFEY NFFNQRNTMV ESCITSQIKE 
250
AAKSPQRDFL DLTLGLNWRS ISSSTSSLRG EESVSSSVDS VCARLNVSAC 
300
LETPQNSNND TVCVKEVREM KERLRMAART FDTPSIISKT SSPASGLKRL 
350
RQKYDTPFPT DARSHMSSEE DHSVSASPSS KYRFVKRNTC SGSKPLERRL 
400
DFDFL
450