fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00730 AHDP, ANL2 ANTHOCYANINLESS 2, ARABIDOPSIS THALIANA HOMEODOMAIN PROTEIN, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1.2)

>AT4G00730.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 334
HindIII A|AGCTT 1003, 1038, 1124
PvuII CAG|CTG 1546
SalI G|TCGAC 927
StyI C|C[AT][AT]GG 792, 1575
XbaI T|CTAGA 1129
XhoI C|TCGAG 205


Click here to view TAIR data

>AT4G00730.2 length:1713
ATGAACTTCG GTAGTCTCTT CGATAACACA CCCGGTGGTG GCTCTACCGG 
50
AGCAAGACTT CTCTCCGGTT TAAGTTATGG CAACCACACC GCCGCAACTA 
100
ACGTCTTACC CGGTGGTGCT ATGGCTCAAG CGGCAGCGGC TGCTAGTCTC 
150
TTCTCTCCTC CTCTAACGAA ATCTGTTTAC GCTTCTTCTG GCCTCTCTCT 
200
AGCCCTCGAG CAACCGGAGA GAGGAACCAA CCGTGGAGAA GCATCGATGA 
250
GGAACAATAA TAACGTCGGA GGAGGAGGCG ATACTTTCGA TGGGAGTGTG 
300
AACAGAAGAA GCCGAGAAGA AGAACATGAG AGTAGATCTG GTAGTGATAA 
350
CGTTGAAGGT ATCTCCGGTG AAGATCAAGA CGCTGCTGAT AAGCCTCCTC 
400
GGAAGAAACG TTATCACCGA CACACTCCTC AACAAATCCA AGAACTCGAA 
450
TCTATGTTCA AAGAGTGTCC GCATCCAGAC GAGAAACAAA GATTAGAACT 
500
AAGTAAGAGA CTTTGCTTAG AGACAAGACA AGTCAAGTTC TGGTTCCAGA 
550
ATCGTCGCAC TCAGATGAAG ACTCAATTAG AGAGGCATGA GAACGCGTTA 
600
TTGAGACAAG AGAACGATAA GTTAAGAGCT GAGAACATGT CTATTCGTGA 
650
AGCAATGAGG AATCCAATCT GCACCAATTG TGGTGGACCT GCCATGCTTG 
700
GTGATGTCTC TCTTGAAGAA CATCATCTCC GTATCGAAAA CGCTCGTTTA 
750
AAAGACGAGC TTGATCGTGT CTGTAACCTC ACCGGTAAGT TCCTTGGCCA 
800
CCACCATAAT CACCACTACA ACTCCTCCTT AGAACTCGCT GTCGGCACCA 
850
ACAACAACGG TGGACATTTC GCTTTCCCTC CTGATTTCGG CGGTGGTGGT 
900
GGTTGCTTAC CTCCGCAGCA GCAGCAGTCG ACGGTGATTA ATGGGATTGA 
950
TCAGAAGTCA GTTTTGCTGG AGCTGGCTTT AACTGCTATG GATGAGTTAG 
1000
TGAAGCTTGC TCAGAGTGAA GAACCGTTAT GGGTCAAAAG CTTGGACGGT 
1050
GAGAGAGACG AGCTTAACCA AGATGAGTAC ATGAGAACAT TTTCATCTAC 
1100
TAAACCAACC GGTTTAGCTA CTGAAGCTTC TAGAACCTCT GGTATGGTCA 
1150
TCATCAATAG CTTAGCTCTC GTCGAGACTT TAATGGACTC CAATCGGTGG 
1200
ACGGAGATGT TCCCGTGTAA CGTCGCAAGA GCTACAACCA CCGACGTTAT 
1250
ATCCGGTGGG ATGGCTGGAA CAATAAATGG TGCACTTCAA CTGATGAATG 
1300
CAGAGCTACA AGTTTTGTCT CCACTGGTTC CGGTTCGTAA TGTTAATTTC 
1350
CTCCGGTTCT GCAAACAGCA CGCGGAGGGT GTGTGGGCGG TGGTGGATGT 
1400
ATCAATTGAT CCTGTCAGGG AAAACTCTGG TGGTGCCCCG GTAATCCGGC 
1450
GACTACCATC AGGATGTGTG GTGCAGGATG TGTCTAATGG ATACTCTAAG 
1500
GTCACGTGGG TGGAGCATGC AGAATACGAC GAGAACCAAA TCCACCAGCT 
1550
GTACAGGCCG TTGCTACGGT CAGGCCTTGG TTTTGGCTCT CAAAGATGGC 
1600
TCGCTACACT TCAGAGACAG TGCGAGTGTC TCGCCATCCT CATTTCTTCC 
1650
TCCGTTACAT CTCACGACAA CACATGTCCG TTTCTTACAC ACTTGTCATT 
1700
ATGCTTAACA TAA
1750

>AT4G00730.2 longest ORF length:570
MNFGSLFDNT PGGGSTGARL LSGLSYGNHT AATNVLPGGA MAQAAAAASL 
50
FSPPLTKSVY ASSGLSLALE QPERGTNRGE ASMRNNNNVG GGGDTFDGSV 
100
NRRSREEEHE SRSGSDNVEG ISGEDQDAAD KPPRKKRYHR HTPQQIQELE 
150
SMFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENAL 
200
LRQENDKLRA ENMSIREAMR NPICTNCGGP AMLGDVSLEE HHLRIENARL 
250
KDELDRVCNL TGKFLGHHHN HHYNSSLELA VGTNNNGGHF AFPPDFGGGG 
300
GCLPPQQQQS TVINGIDQKS VLLELALTAM DELVKLAQSE EPLWVKSLDG 
350
ERDELNQDEY MRTFSSTKPT GLATEASRTS GMVIINSLAL VETLMDSNRW 
400
TEMFPCNVAR ATTTDVISGG MAGTINGALQ LMNAELQVLS PLVPVRNVNF 
450
LRFCKQHAEG VWAVVDVSID PVRENSGGAP VIRRLPSGCV VQDVSNGYSK 
500
VTWVEHAEYD ENQIHQLYRP LLRSGLGFGS QRWLATLQRQ CECLAILISS 
550
SVTSHDNTCP FLTHLSLCLT 
600