fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00870 bHLH014 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G00870.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 393, 994
PstI CTGCA|G 65
SacI GAGCT|C 409


Click here to view TAIR data

>AT4G00870.1 length:1272
ATGTATAATC TCACTTTCTC TCCATCATTG TCCTCTTCTT TGCTCTCTTT 
50
TACACAACAA ACTCCTGCAG CCATAGTGTC CTCTTCTCCT CCGGATTTAG 
100
TACTTCAACA AAAACTCCGG TTTGTCGTGG AAACCTCACC GGACCGATGG 
150
GCTTATGTCA TTTTTTGGCA AAAGATGTTT GATGATCAAT CGGACCGGTC 
200
TTACTTGGTT TGGGTTGATG GTCATTTCTG TGGAAACAAG AACAACAATT 
250
CCCAAGAAAA TTATACAACA AACAGCATCG AGTGTGAGCT GATGATGGAC 
300
GGTGGAGATG ATCTGGAGTT GTTCTATGCC GCATCGTTTT ACGGTGAAGA 
350
TAGATCGCCG AGAAAGGAAG TATCCGATGA ATCTTTGGTT TGGTTAACCG 
400
GTCCCGACGA GCTCCGGTTT AGCAACTACG AGAGGGCTAA AGAAGCCGGT 
450
TTTCACGGGG TACACACATT GGTCTCCATA CCCATCAACA ATGGCATTAT 
500
CGAACTTGGT TCGTCTGAAT CAATTATACA AAACCGGAAC TTTATAAACC 
550
GAGTCAAGTC CATATTCGGG TCGGGTAAAA CAACAAAACA CACTAACCAA 
600
ACCGGTTCTT ACCCTAAACC GGCGGTATCA GATCATTCGA AAAGCGGAAA 
650
TCAGCAATTC GGGTCGGAAA GAAAACGGAG GAGGAAACTT GAGACGACAA 
700
GGGTAGCTGC GGCGACGAAA GAGAAACATC ATCCGGCGGT TTTGTCCCAC 
750
GTGGAAGCGG AGAAGCAACG GAGAGAGAAG CTAAACCACC GGTTTTACGC 
800
TCTACGTGCC ATCGTACCAA AAGTGTCACG AATGGACAAA GCGTCACTTT 
850
TATCCGACGC AGTTTCGTAC ATAGAAAGTC TTAAATCCAA AATCGATGAT 
900
CTCGAAACTG AGATCAAGAA AATGAAGATG ACGGAGACAG ATAAATTAGA 
950
CAACAGCAGC AGCAATACGT CTCCGTCTTC CGTTGAGTAC CAAGTTAACC 
1000
AGAAACCTTC AAAATCAAAC AGAGGCTCTG ACTTGGAAGT GCAAGTGAAG 
1050
ATCGTCGGAG AAGAAGCCAT AATTAGGGTT CAGACAGAGA ATGTGAACCA 
1100
TCCTACGTCG GCATTGATGA GTGCGTTAAT GGAAATGGAT TGTCGTGTAC 
1150
AACACGCGAA CGCGTCGCGC TTGAGTCAGG TTATGGTTCA AGATGTTGTT 
1200
GTTTTGGTTC CAGAAGGATT AAGATCGGAA GATAGGCTTA GGACCACACT 
1250
TGTCCGAACC CTAAGCCTAT AA
1300

>AT4G00870.1 longest ORF length:423
MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW 
50
AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD 
100
GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG 
150
FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ 
200
TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH 
250
VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD 
300
LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK 
350
IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV 
400
VLVPEGLRSE DRLRTTLVRT LSL
450