Locus |
Common name |
Short description |
AT4G00940 |
AtDof4,1 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT4G00940.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
364 |
SacI
| GAGCT|C |
530 |
SpeI
| A|CTAGT |
52 |
StyI
| C|C[AT][AT]GG |
271, 852 |
XbaI
| T|CTAGA |
349 |
Click here to view TAIR data
>AT4G00940.1 length:885
ATGGACCATC ATCAGTATCA TCATCATGAT CAATACCAAC ATCAGATGAT | 50 |
GACTAGTACT AACAATAATT CCTATAACAC CATCGTCACA ACACAACCAC | 100 |
CACCAACAAC AACAACAATG GATTCAACAA CAGCAACAAC TATGATAATG | 150 |
GATGACGAGA AGAAGTTGAT GACGACAATG AGCACTAGGC CGCAAGAACC | 200 |
AAGAAACTGT CCAAGATGCA ACTCAAGCAA CACCAAGTTT TGTTATTACA | 250 |
ACAACTACAG CTTAGCACAG CCTAGGTACT TGTGTAAGTC TTGTCGGAGA | 300 |
TATTGGACTG AAGGTGGCTC TCTCCGTAAC GTCCCCGTAG GCGGAGGTTC | 350 |
TAGAAAGAAC AAGAAGCTTC CATTTCCTAA TTCCTCTACT TCTTCTTCCA | 400 |
CCAAGAACCT CCCGGATCTC AACCCTCCTT TCGTCTTCAC ATCATCAGCT | 450 |
TCATCATCAA ACCCTAGCAA GACGCATCAA AACAATAATG ACCTCAGCCT | 500 |
ATCCTTCTCC TCCCCTATGC AAGACAAGCG AGCTCAAGGG CATTACGGTC | 550 |
ATTTCAGTGA GCAAGTTGTG ACAGGAGGGC AGAACTGTCT TTTCCAAGCT | 600 |
CCTATGGGAA TGATTCAGTT TCGTCAAGAG TATGATCATG AGCACCCCAA | 650 |
AAAGAATCTT GGGTTTTCAT TAGACAGGAA CGAGGAAGAG ATTGGTAATC | 700 |
ATGATAACTT CGTTGTTAAT GAGGAAGGAA GTAAGATGAT GTATCCTTAT | 750 |
GGAGATCATG AAGACCGTCA ACAACATCAC CATGTGAGAC ACGATGATGG | 800 |
TAATAAGAAG AGAGAAGGTG GTTCAAGCAA TGAGCTATGG AGCGGAATCA | 850 |
TCCTAGGTGG TGATAGTGGT GGACCAACAT GGTGA | 900 |
>AT4G00940.1 longest ORF length:294
MDHHQYHHHD QYQHQMMTST NNNSYNTIVT TQPPPTTTTM DSTTATTMIM | 50 |
DDEKKLMTTM STRPQEPRNC PRCNSSNTKF CYYNNYSLAQ PRYLCKSCRR | 100 |
YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA | 150 |
SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA | 200 |
PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY | 250 |
GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW | 300 |
|