fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G00940 AtDof4,1 Dof-type zinc finger DNA-binding family protein (.1)

>AT4G00940.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 364
SacI GAGCT|C 530
SpeI A|CTAGT 52
StyI C|C[AT][AT]GG 271, 852
XbaI T|CTAGA 349


Click here to view TAIR data

>AT4G00940.1 length:885
ATGGACCATC ATCAGTATCA TCATCATGAT CAATACCAAC ATCAGATGAT 
50
GACTAGTACT AACAATAATT CCTATAACAC CATCGTCACA ACACAACCAC 
100
CACCAACAAC AACAACAATG GATTCAACAA CAGCAACAAC TATGATAATG 
150
GATGACGAGA AGAAGTTGAT GACGACAATG AGCACTAGGC CGCAAGAACC 
200
AAGAAACTGT CCAAGATGCA ACTCAAGCAA CACCAAGTTT TGTTATTACA 
250
ACAACTACAG CTTAGCACAG CCTAGGTACT TGTGTAAGTC TTGTCGGAGA 
300
TATTGGACTG AAGGTGGCTC TCTCCGTAAC GTCCCCGTAG GCGGAGGTTC 
350
TAGAAAGAAC AAGAAGCTTC CATTTCCTAA TTCCTCTACT TCTTCTTCCA 
400
CCAAGAACCT CCCGGATCTC AACCCTCCTT TCGTCTTCAC ATCATCAGCT 
450
TCATCATCAA ACCCTAGCAA GACGCATCAA AACAATAATG ACCTCAGCCT 
500
ATCCTTCTCC TCCCCTATGC AAGACAAGCG AGCTCAAGGG CATTACGGTC 
550
ATTTCAGTGA GCAAGTTGTG ACAGGAGGGC AGAACTGTCT TTTCCAAGCT 
600
CCTATGGGAA TGATTCAGTT TCGTCAAGAG TATGATCATG AGCACCCCAA 
650
AAAGAATCTT GGGTTTTCAT TAGACAGGAA CGAGGAAGAG ATTGGTAATC 
700
ATGATAACTT CGTTGTTAAT GAGGAAGGAA GTAAGATGAT GTATCCTTAT 
750
GGAGATCATG AAGACCGTCA ACAACATCAC CATGTGAGAC ACGATGATGG 
800
TAATAAGAAG AGAGAAGGTG GTTCAAGCAA TGAGCTATGG AGCGGAATCA 
850
TCCTAGGTGG TGATAGTGGT GGACCAACAT GGTGA
900

>AT4G00940.1 longest ORF length:294
MDHHQYHHHD QYQHQMMTST NNNSYNTIVT TQPPPTTTTM DSTTATTMIM 
50
DDEKKLMTTM STRPQEPRNC PRCNSSNTKF CYYNNYSLAQ PRYLCKSCRR 
100
YWTEGGSLRN VPVGGGSRKN KKLPFPNSST SSSTKNLPDL NPPFVFTSSA 
150
SSSNPSKTHQ NNNDLSLSFS SPMQDKRAQG HYGHFSEQVV TGGQNCLFQA 
200
PMGMIQFRQE YDHEHPKKNL GFSLDRNEEE IGNHDNFVVN EEGSKMMYPY 
250
GDHEDRQQHH HVRHDDGNKK REGGSSNELW SGIILGGDSG GPTW
300