fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01120 ATBZIP54, GBF2 BASIC REGION/LEUCINE ZIPPER MOTIF 5, G-box binding factor 2 (.1)

>AT4G01120.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
NcoI C|CATGG 730
NheI G|CTAGC 1075
PvuII CAG|CTG 371
SacI GAGCT|C 495
StyI C|C[AT][AT]GG 730
XhoI C|TCGAG 986


Click here to view TAIR data

>AT4G01120.1 length:1083
ATGGGTAGCA ACGAAGAAGG AAACCCCACT AACAACTCTG ATAAGCCATC 
50
GCAAGCTGCT GCTCCTGAGC AGAGTAATGT TCATGTGTAT CATCATGACT 
100
GGGCTGCTAT GCAGGCATAT TATGGGCCTA GAGTTGGTAT ACCTCAATAT 
150
TACAACTCAA ATTTGGCGCC TGGTCATGCT CCACCGCCTT ATATGTGGGC 
200
GTCTCCATCG CCAATGATGG CTCCTTATGG AGCACCATAT CCACCATTTT 
250
GCCCTCCTGG TGGAGTTTAT GCTCATCCTG GTGTTCAAAT GGGCTCACAA 
300
CCACAAGGTC CTGTTTCTCA ATCAGCATCT GGAGTTACAA CCCCTTTGAC 
350
CATTGATGCA CCAGCTAATT CAGCTGGAAA CTCAGATCAT GGGTTCATGA 
400
AAAAGCTGAA AGAGTTCGAT GGACTTGCAA TGTCAATAAG CAATAACAAA 
450
GTTGGGAGTG CTGAACATAG CAGCAGTGAA CATAGGAGTT CTCAGAGCTC 
500
CGAGAATGAT GGCTCTAGCA ATGGTAGTGA TGGTAATACA ACTGGGGGAG 
550
AACAATCTAG GAGGAAAAGA AGGCAACAAA GATCACCAAG CACTGGTGAA 
600
AGACCCTCAT CTCAAAACAG TCTGCCTCTT AGAGGTGAAA ATGAGAAACC 
650
CGATGTGACT ATGGGGACTC CTGTTATGCC CACAGCAATG AGTTTCCAAA 
700
ACTCTGCTGG CATGAACGGT GTGCCACAGC CATGGAATGA AAAAGAGGTT 
750
AAACGAGAGA AGAGAAAACA GTCAAACCGA GAATCTGCTA GGAGGTCAAG 
800
ACTGAGGAAG CAGGCTGAAA CAGAACAACT ATCTGTCAAA GTTGACGCAT 
850
TAGTAGCTGA GAACATGTCT CTGAGGTCTA AACTAGGCCA GCTAAACAAT 
900
GAGTCTGAGA AACTACGGCT GGAGAACGAA GCTATATTGG ATCAACTGAA 
950
AGCGCAAGCA ACAGGGAAAA CAGAGAACCT GATCTCTCGA GTTGATAAGA 
1000
ACAACTCTGT ATCAGGTAGC AAAACTGTGC AGCATCAACT GTTAAATGCA 
1050
AGTCCGATAA CCGATCCTGT CGCGGCTAGC TGA
1100

>AT4G01120.1 longest ORF length:360
MGSNEEGNPT NNSDKPSQAA APEQSNVHVY HHDWAAMQAY YGPRVGIPQY 
50
YNSNLAPGHA PPPYMWASPS PMMAPYGAPY PPFCPPGGVY AHPGVQMGSQ 
100
PQGPVSQSAS GVTTPLTIDA PANSAGNSDH GFMKKLKEFD GLAMSISNNK 
150
VGSAEHSSSE HRSSQSSEND GSSNGSDGNT TGGEQSRRKR RQQRSPSTGE 
200
RPSSQNSLPL RGENEKPDVT MGTPVMPTAM SFQNSAGMNG VPQPWNEKEV 
250
KREKRKQSNR ESARRSRLRK QAETEQLSVK VDALVAENMS LRSKLGQLNN 
300
ESEKLRLENE AILDQLKAQA TGKTENLISR VDKNNSVSGS KTVQHQLLNA 
350
SPITDPVAAS 
400