fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01500 NGA4 NGATHA4, AP2/B3-like transcriptional factor family protein (.1)

>AT4G01500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 738
NheI G|CTAGC 49
SalI G|TCGAC 765


Click here to view TAIR data

>AT4G01500.1 length:1002
ATGAATATCT CAACAATGAA TCTTGACCAA GAACTCGCCG AGATCAGAGC 
50
TAGCAGTTCC GACCACACCA ATTACTTCTA CAGCTCGGAG AGGAGAGAGC 
100
ACATGTTCGA CAAAGTGTTG ACACCAAGTG ACGTCGGTAA ACTAAACCGG 
150
CTCGTGATTC CAAAGCAACA TGCAGAGAAC TTCTTCCCTT TAGAGGACAA 
200
TCAAAACGGC ACAGTGTTGG ATTTCCAAGA CAAAAACGGC AAGATGTGGA 
250
GGTTTCGTTA CTCGTATTGG AACAGTAGCC AAAGCTACGT GATGACCAAA 
300
GGATGGAGCC GTTTCGTCAA GGAGAAGAAA CTCTTCGCCG GAGACACCGT 
350
CTCTTTCTAC CGTGGCTACA TCCCTGACGA TAACGCACAA CCGGAGAGAC 
400
GACGGAAAAT AATGTTCATC GATTGGAGGC CTAGAGCCGA GATAAACTTC 
450
GTACACAACA TTAACAATCA TAACTTCGTT TTCGGGTCTC CGACATATCC 
500
AACGGCTAGG TTTTATCCGG TGACGCCGGA ATATTCCATG CCATACCGGA 
550
GTTTTCCACC GTTTTATCAG AACCAATTTC AAGAACGGGA ATATTTAGGG 
600
TATGGTTATG GTAGAGTTGT TAATGGTAAT GGAGTGCGTT ACTACGCAGG 
650
ATCACCGTTG GATCAACATC ATCAGTGGAA TCTTGGTCGA TCTGAGCCGT 
700
TGGTTTATGA CTCGGTTCCA GTTTTTCCAG CGGGGAGGGT ACCTCCGTCG 
750
GCGCCTCCTC AGCCGTCGAC GACGAAGAAG CTGAGGCTGT TTGGGGTTGA 
800
CGTGGAAGAG TCTTCATCTT CAGGGGATAC ACGTGGCGAA ATGGGAGTAG 
850
CAGGGTACTC TTCCTCGTCT CCGGTTGTGA TCAGAGACGA TGATCAATCA 
900
TTTTGGAGGT CGCCACGTGG CGAAATGGCA TCGTCTTCTT CGGCTATGCA 
950
GCTAAGTGAT GATGAAGAAT ATAAGAGGAA AGGGAAATCT TTAGAGCTTT 
1000
GA
1050

>AT4G01500.1 longest ORF length:333
MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR 
50
LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK 
100
GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF 
150
VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG 
200
YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS 
250
APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS 
300
FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
350