fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01540 ANAC068, NTM1 Arabidopsis NAC domain containing protein 68, NAC with transmembrane motif1 (.1.2)

>AT4G01540.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 167, 1042
BglII A|GATCT 180, 1146
NdeI CA|TATG 482
PstI CTGCA|G 470
StyI C|C[AT][AT]GG 382, 985, 1065


Click here to view TAIR data

>AT4G01540.1 length:1422
ATGATGAAAG GTCTGATTGG GTATAGATTT AGTCCGACGG GAGAGGAAGT 
50
GATCAACCAT TACCTAAAGA ACAAACTTCT GGGTAAGTAT TGGCTCGTTG 
100
ATGAAGCTAT TAGCGAGATC AACATCTTGA GTCACAAACC CAGCAAGGAT 
150
TTGCCTAAGT TAGCTAGGAT CCAATCGGAA GATCTTGAAT GGTATTTCTT 
200
CTCTCCGATT GAGTACACGA ACCCGAATAA GATGAAAATG AAGAGGACGA 
250
CAGGTTCTGG GTTTTGGAAA CCTACTGGTG TTGATCGGGA AATTAGGGAT 
300
AAAAGAGGAA ATGGTGTTGT GATAGGGATT AAGAAGACGC TTGTGTACCA 
350
TGAAGGTAAG AGTCCTCATG GAGTTAGAAC TCCTTGGGTT ATGCACGAGT 
400
ATCACATCAC TTGCTTGCCT CATCATAAGA GGAAATATGT TGTCTGCCAA 
450
GTAAAGTATA AGGGTGAAGC TGCAGAAATT TCATATGAGC CAAGTCCCTC 
500
TTTGGTATCC GATTCGCATA CCGTCATAGC GATTACCGGA GAACCGGAAC 
550
CTGAGCTTCA GGTTGAGCAG CCAGGTAAAG AAAATCTCTT GGGTATGTCT 
600
GTAGATGATT TGATAGAACC AATGAACCAA CAAGAGGAGC CACAAGGTCC 
650
TCACTTAGCT CCGAATGATG ATGAGTTTAT ACGTGGATTG AGGCATGTTG 
700
ATCGAGGGAC GGTTGAATAT TTGTTTGCCA ATGAAGAAAA CATGGATGGT 
750
TTGTCTATGA ATGACTTGAG AATCCCAATG ATCGTCCAAC AAGAGGATCT 
800
CTCTGAGTGG GAGGGATTTA ACGCAGACAC CTTTTTCAGC GACAACAACA 
850
ATAACTATAA CCTTAACGTG CATCATCAAC TAACGCCTTA CGGCGATGGC 
900
TATTTGAATG CATTTTCGGG TTATAACGAA GGGAATCCTC CCGATCACGA 
950
ATTAGTGATG CAAGAGAACC GCAACGATCA CATGCCAAGG AAACCTGTGA 
1000
CAGGGACCAT TGATTATAGC AGCGATAGTG GCAGTGATGC TGGATCCATA 
1050
TCTACAACGA GTTACCAAGG AACATCAAGT CCAAATATTA GTGTTGGTAG 
1100
TTCAAGTAGA CACTTGTCAA GTTGCTCAAG CACAGACTCT TGCAAAGATC 
1150
TACAAACTTG TACAGATCCT TCAATAATCA GTAGAGAGAT CCGGGAATTA 
1200
ACACAAGAGG TGAAACAAGA AATCCCAAGA GCTGTTGATG CACCCATGAA 
1250
CAATGAGTCA TCTTTGGTGA AAACAGAGAA GAAAGGCTTG TTTATTGTAG 
1300
AGGACGCAAT GGAGAGAAAC CGCAAGAAAC CACGATTTAT CTATCTCATG 
1350
AAGATGATCA TAGGCAACAT CATATCGGTT TTACTACCCG TCAAAAGATT 
1400
GATCCCGGTG AAGAAGTTAT GA
1450

>AT4G01540.1 longest ORF length:473
MMKGLIGYRF SPTGEEVINH YLKNKLLGKY WLVDEAISEI NILSHKPSKD 
50
LPKLARIQSE DLEWYFFSPI EYTNPNKMKM KRTTGSGFWK PTGVDREIRD 
100
KRGNGVVIGI KKTLVYHEGK SPHGVRTPWV MHEYHITCLP HHKRKYVVCQ 
150
VKYKGEAAEI SYEPSPSLVS DSHTVIAITG EPEPELQVEQ PGKENLLGMS 
200
VDDLIEPMNQ QEEPQGPHLA PNDDEFIRGL RHVDRGTVEY LFANEENMDG 
250
LSMNDLRIPM IVQQEDLSEW EGFNADTFFS DNNNNYNLNV HHQLTPYGDG 
300
YLNAFSGYNE GNPPDHELVM QENRNDHMPR KPVTGTIDYS SDSGSDAGSI 
350
STTSYQGTSS PNISVGSSSR HLSSCSSTDS CKDLQTCTDP SIISREIREL 
400
TQEVKQEIPR AVDAPMNNES SLVKTEKKGL FIVEDAMERN RKKPRFIYLM 
450
KMIIGNIISV LLPVKRLIPV KKL
500