fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01550 ANAC069, NTM2 NAC with Transmembrane Motif 2, NAC domain containing protein 69 (.1.2)

>AT4G01550.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 279
EcoRV GAT|ATC 540
HpaI GTT|AAC 382
StyI C|C[AT][AT]GG 558
XhoI C|TCGAG 108


Click here to view TAIR data

>AT4G01550.2 length:987
ATGCATGAGT ATCACATCAC TTGTTTGCCT CAAGATCAGA GGAACTATGT 
50
TATCTGCCAA GTGATGTATA AGGGTGAAGA TGGAGACGTC CCATCTGGTG 
100
GTAACAACTC GAGTGAGCCG AGTCAATCTT TGGTCTCTGA TTCGAATACT 
150
GTCAGAGCTA CGAGTCCCAC AGCGCTTGAG TTTGAGAAGC CAGGTCAAGA 
200
AAATTTCTTT GGTATGTCTG TGGATGATTT GGGGACTCCA AAGAATGAAC 
250
AAGAAGATTT CTCTTTGTGG GATGTACTGG ATCCAGACAT GTTATTCAGT 
300
GACAATAACA ATCCTACTGT GCATCCACAA GCTCCTCACT TAACCCCGAA 
350
TGATGATGAG TTTCTCGGTG GATTGAGGCA TGTTAACCGA GAGCAGGTTG 
400
AATATTTGTT TGCCAATGAA GATTTCATAT CCAGACCAAC CTTATCTATG 
450
ACCGAGAACC GCAACGATCA CAGGCCAAAG AAGGCTTTGT CAGGGATTAT 
500
TGTTGATTAT AGCAGTGATA GTAATAGTGA TGCTGAATCG ATATCTGCAA 
550
CGAGTTACCA AGGAACATCA AGTCCAGGTG ATGATAGTGT TGGTAGTTCG 
600
AATAGACAAT TTCTCCAGAC TGGTGGAGAT GAGATTCTAT CGTCTTGCAA 
650
TGATCTACAA ACCTATGGAG AACCTTCCAT CAGTAGTAGC ACCCGGCAAT 
700
CTCAACTCAC ACGAAGCATC ATACGACCAA AACAAGAGGT GAAACAAGAT 
750
ACATCAAGAG CGGTTGATAG TGATACATCC ATAGACAAGG AGTCATCTAT 
800
GGTGAAGACA GAGAAGAAGA GCTGGTTTAT TACAGAGGAA GCAATGGAGA 
850
GAAACCGCAA CAATCCACGG TATATCTATC TCATGAGAAT GATCATAGGC 
900
TTCATTCTCT TGCTGGCTCT CATTAGCAAC ATCATATCGG TGTTACAAAA 
950
CTTGAACCCG GCGATGAAGT TTGATCGCGA GAGATAG
1000

>AT4G01550.2 longest ORF length:328
MHEYHITCLP QDQRNYVICQ VMYKGEDGDV PSGGNNSSEP SQSLVSDSNT 
50
VRATSPTALE FEKPGQENFF GMSVDDLGTP KNEQEDFSLW DVLDPDMLFS 
100
DNNNPTVHPQ APHLTPNDDE FLGGLRHVNR EQVEYLFANE DFISRPTLSM 
150
TENRNDHRPK KALSGIIVDY SSDSNSDAES ISATSYQGTS SPGDDSVGSS 
200
NRQFLQTGGD EILSSCNDLQ TYGEPSISSS TRQSQLTRSI IRPKQEVKQD 
250
TSRAVDSDTS IDKESSMVKT EKKSWFITEE AMERNRNNPR YIYLMRMIIG 
300
FILLLALISN IISVLQNLNP AMKFDRER
350