fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01680 ATMYB55 myb domain protein 55 (.1.2.3)

>AT4G01680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 324
HindIII A|AGCTT 70
NdeI CA|TATG 995
SacI GAGCT|C 111
XbaI T|CTAGA 555


Click here to view TAIR data

>AT4G01680.1 length:1011
ATGGGAAGAC ATTCATGTTG TTACAAACAG AAACTGAGGA AAGGACTTTG 
50
GTCTCCTGAA GAAGATGAGA AGCTTCTTCG TTACATCACT AAGTATGGTC 
100
ATGGTTGCTG GAGCTCTGTC CCTAAACAAG CTGGTTTACA GAGATGTGGA 
150
AAAAGTTGTA GATTAAGATG GATAAATTAT TTAAGACCAG ATTTGAAGAG 
200
AGGAGCATTT TCTCAAGATG AAGAAAATCT CATTATTGAA CTTCATGCCG 
250
TTCTTGGCAA TAGATGGTCT CAGATAGCTG CACAGCTTCC TGGAAGAACC 
300
GACAATGAAA TCAAGAATCT TTGGAATTCT TGTTTGAAGA AGAAATTGAG 
350
GCTGAGAGGA ATTGACCCGG TTACACACAA GCTCTTAACC GAAATCGAAA 
400
CCGGTACAGA TGACAAAACA AAACCGGTTG AGAAGAGTCA ACAGACCTAC 
450
CTCGTTGAGA CTGATGGCTC CTCTAGTACC ACTACTTGTA GTACTAACCA 
500
AAACAACAAC ACTGATCATC TTTATACCGG AAATTTCGGT TTTCAACGGT 
550
TAAGTCTAGA AAACGGTTCA AGAATCGCAG CCGGTTCTGA CCTCGGTATC 
600
TGGATTCCCC AAACCGGAAG AAACCATCAT CATCATGTCG ATGAAACCAT 
650
CCCTAGTGCA GTGGTACTAC CCGGTTCAAT GTTCTCATCC GGTTTAACCG 
700
GTTATAGATC CTCCAATCTC GGTTTAATTG AATTGGAAAA CTCATTCTCA 
750
ACCGGGCCAA TGATGACAGA GCATCAGCAA ATTCAAGAGA GTAACTACAA 
800
CAATTCAACA TTCTTTGGAA ATGGGAATCT GAATTGGGGA TTAACAATGG 
850
AGGAAAATCA AAATCCATTC ACAATATCGA ATCATTCAAA TTCGTCCTTA 
900
TACAGTGATA TAAAATCAGA GACCAATTTT TTTGGCACAG AGGCTACAAA 
950
TGTTGGTATG TGGCCATGTA ACCAGCTCCA GCCTCAGCAA CATGCATATG 
1000
GCCATATATA A
1050

>AT4G01680.1 longest ORF length:336
MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGLQRCG 
50
KSCRLRWINY LRPDLKRGAF SQDEENLIIE LHAVLGNRWS QIAAQLPGRT 
100
DNEIKNLWNS CLKKKLRLRG IDPVTHKLLT EIETGTDDKT KPVEKSQQTY 
150
LVETDGSSST TTCSTNQNNN TDHLYTGNFG FQRLSLENGS RIAAGSDLGI 
200
WIPQTGRNHH HHVDETIPSA VVLPGSMFSS GLTGYRSSNL GLIELENSFS 
250
TGPMMTEHQQ IQESNYNNST FFGNGNLNWG LTMEENQNPF TISNHSNSSL 
300
YSDIKSETNF FGTEATNVGM WPCNQLQPQQ HAYGHI
350