fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G01680 ATMYB55 myb domain protein 55 (.1.2.3)

>AT4G01680.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 360
HindIII A|AGCTT 70
NdeI CA|TATG 1031
SacI GAGCT|C 111
XbaI T|CTAGA 591


Click here to view TAIR data

>AT4G01680.2 length:1047
ATGGGAAGAC ATTCATGTTG TTACAAACAG AAACTGAGGA AAGGACTTTG 
50
GTCTCCTGAA GAAGATGAGA AGCTTCTTCG TTACATCACT AAGTATGGTC 
100
ATGGTTGCTG GAGCTCTGTC CCTAAACAAG CTGGTACGTT TTTATTTATC 
150
CAAATTCATC TTTTGTTTGG TTTACAGAGA TGTGGAAAAA GTTGTAGATT 
200
AAGATGGATA AATTATTTAA GACCAGATTT GAAGAGAGGA GCATTTTCTC 
250
AAGATGAAGA AAATCTCATT ATTGAACTTC ATGCCGTTCT TGGCAATAGA 
300
TGGTCTCAGA TAGCTGCACA GCTTCCTGGA AGAACCGACA ATGAAATCAA 
350
GAATCTTTGG AATTCTTGTT TGAAGAAGAA ATTGAGGCTG AGAGGAATTG 
400
ACCCGGTTAC ACACAAGCTC TTAACCGAAA TCGAAACCGG TACAGATGAC 
450
AAAACAAAAC CGGTTGAGAA GAGTCAACAG ACCTACCTCG TTGAGACTGA 
500
TGGCTCCTCT AGTACCACTA CTTGTAGTAC TAACCAAAAC AACAACACTG 
550
ATCATCTTTA TACCGGAAAT TTCGGTTTTC AACGGTTAAG TCTAGAAAAC 
600
GGTTCAAGAA TCGCAGCCGG TTCTGACCTC GGTATCTGGA TTCCCCAAAC 
650
CGGAAGAAAC CATCATCATC ATGTCGATGA AACCATCCCT AGTGCAGTGG 
700
TACTACCCGG TTCAATGTTC TCATCCGGTT TAACCGGTTA TAGATCCTCC 
750
AATCTCGGTT TAATTGAATT GGAAAACTCA TTCTCAACCG GGCCAATGAT 
800
GACAGAGCAT CAGCAAATTC AAGAGAGTAA CTACAACAAT TCAACATTCT 
850
TTGGAAATGG GAATCTGAAT TGGGGATTAA CAATGGAGGA AAATCAAAAT 
900
CCATTCACAA TATCGAATCA TTCAAATTCG TCCTTATACA GTGATATAAA 
950
ATCAGAGACC AATTTTTTTG GCACAGAGGC TACAAATGTT GGTATGTGGC 
1000
CATGTAACCA GCTCCAGCCT CAGCAACATG CATATGGCCA TATATAA
1050

>AT4G01680.2 longest ORF length:348
MGRHSCCYKQ KLRKGLWSPE EDEKLLRYIT KYGHGCWSSV PKQAGTFLFI 
50
QIHLLFGLQR CGKSCRLRWI NYLRPDLKRG AFSQDEENLI IELHAVLGNR 
100
WSQIAAQLPG RTDNEIKNLW NSCLKKKLRL RGIDPVTHKL LTEIETGTDD 
150
KTKPVEKSQQ TYLVETDGSS STTTCSTNQN NNTDHLYTGN FGFQRLSLEN 
200
GSRIAAGSDL GIWIPQTGRN HHHHVDETIP SAVVLPGSMF SSGLTGYRSS 
250
NLGLIELENS FSTGPMMTEH QQIQESNYNN STFFGNGNLN WGLTMEENQN 
300
PFTISNHSNS SLYSDIKSET NFFGTEATNV GMWPCNQLQP QQHAYGHI
350