fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G02670 ATIDD12 indeterminate(ID)-domain 12 (.1)

>AT4G02670.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
ApaI GGGCC|C 1193
BglII A|GATCT 536
EcoRI G|AATTC 94
NcoI C|CATGG 319
SacI GAGCT|C 413
StyI C|C[AT][AT]GG 319, 696
XbaI T|CTAGA 409
XhoI C|TCGAG 582


Click here to view TAIR data

>AT4G02670.1 length:1209
ATGTTTTCTT CTCATTCCTT GTCCTATAAG CTAAGCTCTT TGTCTACTGA 
50
AGCAAGTGCC TCTTCTGGTA ACAACACACT CAGTACCATC CAAGAATTCA 
100
GTGGCTTTCA CAATGTGATT TCTAGTGTTT GTACACACAC AGAGACTCAC 
150
AAGCCTAAGA AAAAGAGAGG CCTTCCTGGA AATCCTGATC CAGATGCAGA 
200
AGTGATCGCA TTATCACCAA AGACACTTCT TGCAACAAAC AGATTCGTTT 
250
GTGAGATATG CAACAAAGGG TTTCAAAGAG ATCAGAATCT ACAGCTTCAC 
300
AGGAGAGGCC ACAATCTTCC ATGGAAGCTG AAACAGAAGA ACACCAAAGA 
350
ACAACAAAAG AAGAAAGTCT ACGTGTGCCC AGAGACAAAC TGTGCTCATC 
400
ACCATCCATC TAGAGCTCTT GGGGATCTCA CAGGGATCAA GAAACACTTT 
450
TGCAGGAAAC ATGGAGAGAA GAAATGGAAA TGTGAAAAGT GTTCAAAGTT 
500
CTATGCTGTT CAATCTGATT GGAAAGCTCA TACCAAGATC TGTGGTACTA 
550
GAGATTATAG ATGTGACTGC GGCACTCTTT TCTCGAGGAA AGACACTTTC 
600
ATAACGCATA GAGCGTTTTG TGATGCATTA GCAGAAGAAA GTGCAAGACT 
650
CCACTCAACT TCTTCCTCCA ATCTCACAAA CCCTAACCCT AATTTCCAAG 
700
GCCATCATTT TATGTTCAAT AAATCTTCCT CCTTGCTCTT CACGTCATCA 
750
CCTCTTTTCA TCGAACCATC ACTTTCCACC GCCGCTCTTT CAACGCCTCC 
800
AACGGCAGCT CTTTCCGCGA CGGCTCTTCT CCAAAAGGCC ACCTCTCTCA 
850
GCTCCACTAC TTTCGGCGGC GGAGGACAGA CTCGATCCAT TGGTCATCAC 
900
CGACATTTGA CGAACGTCAA CGAGTTTCTT GGTGTTGACC GAGTCATGAT 
950
GACGTCAGCT TCTTCGTCTG AGTACGACCA GTTAGTTGTT GATGGGTTTA 
1000
CGTCCACGTG GCAGAAAGCT GACCGTTTGA CCAGAGACTT TCTTGGACTC 
1050
ACGGGTCATG GGGGACACGT TAGCGTCAGA CCTGGGGATA TGCTAGAGTA 
1100
CGCGGGTGGA GTGGCGTTTC CTATGTCGGC GTACGATACC GAATCTCATG 
1150
ATCACTCGTT TCAGAAGGCT TACGATCATC TGGGATTCTC AGGGGCCCAT 
1200
CGTATGTAA
1250

>AT4G02670.1 longest ORF length:402
MFSSHSLSYK LSSLSTEASA SSGNNTLSTI QEFSGFHNVI SSVCTHTETH 
50
KPKKKRGLPG NPDPDAEVIA LSPKTLLATN RFVCEICNKG FQRDQNLQLH 
100
RRGHNLPWKL KQKNTKEQQK KKVYVCPETN CAHHHPSRAL GDLTGIKKHF 
150
CRKHGEKKWK CEKCSKFYAV QSDWKAHTKI CGTRDYRCDC GTLFSRKDTF 
200
ITHRAFCDAL AEESARLHST SSSNLTNPNP NFQGHHFMFN KSSSLLFTSS 
250
PLFIEPSLST AALSTPPTAA LSATALLQKA TSLSSTTFGG GGQTRSIGHH 
300
RHLTNVNEFL GVDRVMMTSA SSSEYDQLVV DGFTSTWQKA DRLTRDFLGL 
350
TGHGGHVSVR PGDMLEYAGG VAFPMSAYDT ESHDHSFQKA YDHLGFSGAH 
400
RM
450