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| Locus | Common name | Short description |
| AT4G03250 | Homeodomain-like superfamily protein (.1) |
>AT4G03250.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, FauI, Fnu4HI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, StuI, SwaI, TliI, TseI, Tsp45I, Tth111I, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 380 |
| AgeI | A|CCGGT | 1257 |
| AluI | AG|CT | 335, 446, 692, 710, 721, 1119, 1412 |
| ApoI | Pu|AATTPy | 12, 377, 501, 574 |
| AvaII | G|G[AT]CC | 555, 705, 1167 |
| AvrII | C|CTAGG | 265 |
| BfaI | C|TAG | 264, 363, 396, 708, 1377, 1410 |
| BsaAI | PyAC|GTPu | 347 |
| BsaJI | C|CNNGG | 265, 925 |
| BsaWI | [AT]|CCGG[AT] | 1257 |
| BslI | CCNNNNN|NNGG | 265, 564, 976, 1176 |
| BsmI | GAATGCN| | 154 |
| BspHI | T|CATGA | 440, 1056 |
| BsrFI | Pu|CCGGPy | 1257 |
| BssKI | |CCNGG | 591, 702, 810 |
| BstBI | TT|CGAA | 1116 |
| BstF5I | GGATGNN| | 553, 766, 1182 |
| BstNI | CC|[AT]GG | 702, 810 |
| BstUI | CG|CG | 380 |
| BstXI | CCANNNNN|NTGG | 552 |
| BstYI | Pu|GATCPy | 750, 1144 |
| BtgI | C|CPuPyGG | 925 |
| Cfr10I | [AG]|CCGG[TC] | 1257 |
| DdeI | C|TNAG | 82, 433, 607, 816, 1150 |
| DpnI | GA-CH3|TC | 170, 194, 329, 578, 749, 1143 |
| DpnII | |GATC | 170, 194, 329, 578, 749, 1143 |
| DraI | TTT|AAA | 901 |
| EcoRI | G|AATTC | 377 |
| EcoRV | GAT|ATC | 1100 |
| HaeII | PuGCGC|Py | 3 |
| HaeIII | GG|CC | 657 |
| HhaI | GCG|C | 2 |
| HinP1I | G|CGC | 2 |
| HinfI | G|ANTC | 219, 353, 647, 756, 1152, 1208, 1328, 1407 |
| HpaII | C|CGG | 591, 1256 |
| Hpy188I | TCN|GA | 35, 327, 608, 650, 759, 1130 |
| HpyCH4IV | A|CGT | 130, 346, 417, 1011 |
| HpyCH4V | TG|CA | 406, 595, 738, 1221, 1236, 1300 |
| MboI | |GATC | 170, 194, 329, 578, 749, 1143 |
| MseI | T|TAA | 77, 119, 696, 900, 1382, 1426 |
| MslI | CAPyNN|NNPuTG | 779, 1061 |
| MspI | C|CGG | 591, 1256 |
| MwoI | GCNNNNN|NNGC | 513 |
| N.BstNBI | GAGTCNNNN|N | 1157 |
| NciI | CC|[CG]GG | 591 |
| NlaIII | CATG| | 134, 222, 439, 773, 1055, 1277 |
| NlaIV | GGN|NCC | 164, 254, 807, 840 |
| NruI | TCG|CGA | 381 |
| PflMI | CCANNNN|NTGG | 976, 1176 |
| PshAI | GACNN|NNGTC | 131 |
| PspGI | |CC[AT]GG | 702, 810 |
| RsaI | GT|AC | 231, 318, 881 |
| Sau3AI | |GATC | 170, 194, 329, 578, 749, 1143 |
| Sau96I | G|GNCC | 555, 705, 1167 |
| ScrFI | CC|NGG | 591, 702, 810 |
| SfcI | C|TPuPyAG | 620 |
| SmlI | C|TPyPuAG | 7 |
| SnaBI | TAC|GTA | 347 |
| SspI | AAT|ATT | 1036 |
| StyI | C|C[AT][AT]GG | 265 |
| Taqƒ¿I | T|CGA | 211, 989, 1115, 1241 |
| TfiI | G|A[AT]TC | 219, 353, 647, 756, 1208, 1328, 1407 |
| Tsp509I | |AATT | 11, 376, 500, 528, 573, 717, 875, 1233 |
| TspRI | NNCA[CG]TGNN| | 514 |
| XbaI | T|CTAGA | 397 |
| XcmI | CCANNNNN|NNNNTGG | 1026 |
Click here to view TAIR data
>AT4G03250.1 length:1431
ATGGCGCTTG AGAATTTCTA CAATGAGCAT AAGTATCCGA CTGAAGAAAT | 50 |
GAAGGGCAAG TTAGCAGAGG AAGTTGGATT AACTGAGAAG CAAGTTTCAG | 100 |
GTTGGTTCTG CCATAGAAGG TTAAAAGACA AACGTCATGT AAAAGAAGAT | 150 |
GGGAATGCCA TTGGGAGCCA AGATCGGTCA AGCGTTGTTC TTCAGGATCG | 200 |
TGGAAGTGGG CTTCGACAGG ATTCATGTGG TAGTACAAAG CAAACGGATT | 250 |
ATTGGAACCC CAAGCCTAGG GAAGTTGAAA GTCAAAGGCT TTATATGGGA | 300 |
AATGCTGATG GTGAAGATAG TACATCTTCT GATCGTAGCT CATCATTACG | 350 |
TAAGAATCTT GTCTCTAGCA AAGATGGAAT TCGCGATGTG GAAAGTTCTA | 400 |
GATATGTTGC ACATAAAGAC GTTATTCAGC ATCCTCAGTT CATGAGAAGC | 450 |
TATGGGTATA ATAAGCCTTC GGGATACTTG AAAGTGAAGG GAGAGAGTGA | 500 |
GAATTTTGCT ATCACTGCCG TAAAGAGACA ATTAGGAAGA CAATACCAAG | 550 |
AGGATGGTCC ACCTCTGGGG GTTGAATTTG ATCCTCTTCC TCCCGGTGCA | 600 |
TTTGAGCCTC AGACTAATCC TATAGTTCAC GAGCCAATAT ATGTTGGGAA | 650 |
TCAGAGACGG CCTCACCTTC CACATTTACT TGGAACGAGG AAGAGCTTTA | 700 |
ATCCTGGTCC TAGCTATGAA TTAGCTCGTA AATCAAAGTT GCATTCGCCA | 750 |
GATCCAGATT CAGAGGATGA TGAGCATGAT GATGATGACA ACATAATGGT | 800 |
TGGAATGGAG CCTGGTCTAA GAGATAAGAA AAGTTTTGGG GAACCAAGAC | 850 |
TGAAATCCCC TTCTACCAGT TTCTATAATT CTGTACCTCG CCACAAATCG | 900 |
TTTAAAGAGA CATTCAAAGG TTCACCACGG GAAATCCCTG TAACTAACAG | 950 |
CAAGAAGGGT TGGATAAGTT CCAAAAGTTG GGCTGAAGGG TCGAGAAACC | 1000 |
ATCTGGTTGC CAACGTCCAA AATCTTTCTG GAAGCAATAT TGAAACCAAT | 1050 |
CAGTCTCATG ATTATGATAA TAATATATCT AATGGCGGAC GCAAGACGGG | 1100 |
ATATCTCACT AAATCTTCGA AGCTGTTACC TCCGAGTAGA AGCAGATCCC | 1150 |
CTGAGTCAAT GGATAGAGGT CCATCTTCTG GGATGGCAGG AATATATCAC | 1200 |
GGGGAGAGGA ATCAAATGAA AATGCAGAGA GAGAAATTGC ATTCGACTGA | 1250 |
TGAACCACCG GTTGCCAAAC GAGTGAAACA TGGGTATATT CAGCAAGTAT | 1300 |
ATGCACCAAA ATCATCATCA TACAGCGAGA TTCTTGAACG AAAAAGCCAG | 1350 |
ATAAATCGGT CTGGTGTGGA ACTGCCTTCT AGTTTAAGCG GGGACGATGA | 1400 |
GACTGACGAA TCTAGCTCGT CAATGGATTA A | 1450 |
>AT4G03250.1 longest ORF length:476
MALENFYNEH KYPTEEMKGK LAEEVGLTEK QVSGWFCHRR LKDKRHVKED | 50 |
GNAIGSQDRS SVVLQDRGSG LRQDSCGSTK QTDYWNPKPR EVESQRLYMG | 100 |
NADGEDSTSS DRSSSLRKNL VSSKDGIRDV ESSRYVAHKD VIQHPQFMRS | 150 |
YGYNKPSGYL KVKGESENFA ITAVKRQLGR QYQEDGPPLG VEFDPLPPGA | 200 |
FEPQTNPIVH EPIYVGNQRR PHLPHLLGTR KSFNPGPSYE LARKSKLHSP | 250 |
DPDSEDDEHD DDDNIMVGME PGLRDKKSFG EPRLKSPSTS FYNSVPRHKS | 300 |
FKETFKGSPR EIPVTNSKKG WISSKSWAEG SRNHLVANVQ NLSGSNIETN | 350 |
QSHDYDNNIS NGGRKTGYLT KSSKLLPPSR SRSPESMDRG PSSGMAGIYH | 400 |
GERNQMKMQR EKLHSTDEPP VAKRVKHGYI QQVYAPKSSS YSEILERKSQ | 450 |
INRSGVELPS SLSGDDETDE SSSSMD | 500 |