Locus |
Common name |
Short description |
AT4G04404 |
|
C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT4G04404.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
434 |
HindIII
| A|AGCTT |
311 |
NcoI
| C|CATGG |
131 |
PstI
| CTGCA|G |
519 |
SpeI
| A|CTAGT |
660 |
StyI
| C|C[AT][AT]GG |
131 |
Click here to view TAIR data
>AT4G04404.1 length:693
ATGTCAATAA AAGAACCATA TTTTATGACT GAGATTGAGG ATCATGAGAT | 50 |
GAATGAAGCT GCGATGAGTT TGGTTATGTT TTCTAAACAA GTTTATGACT | 100 |
TTGATTTGAC TCATGGTAAT GATGATGATT CCATGGATTT AGATCAGCTT | 150 |
AAAGATTGTG TTGAGTCGAT GCTAGACTTC AGGGAAATGG TTTCTAACTC | 200 |
GGGTATGGAA AAGTCTACTA CTTGCAGTGA TGTTGTTGCT CTGAGAAGTA | 250 |
AATTGCAGAG TAAGTCAAGT CATAGATGTC AAATATGTGG CAAGAGTTTT | 300 |
GAGTGTTATC AAGCTTTAGG TGGTCACCGA AGACTTCATA GACCGATTAA | 350 |
AGGGAAATTA GCGCGTAAAA GGGAGTATTA TAAAGATGAT AATTCACTGT | 400 |
TTGATTCATC AGGACCATCA AGAGTGGAGG AGAAGATCTT AGATTGTGTT | 450 |
GAGTTGAAAC AAGACTTCGG CGAACTGCTT CCTTTGAATA GTAAGTTTCA | 500 |
GAAAAGACCT GTGAGTAGCT GCAGTTATAG ATGCAAAATA TGCGGCAAGA | 550 |
GTTTTGGGTG CTTTCAAGCT CTAGGTGCTC TAGGTGGCCA CCAAAGACTT | 600 |
CACAGACCGA TTAAAGGGAA ACTAGCGCGT AAAAGGAAGT ACAGTGAAGA | 650 |
TGATAATACA CTAGTTGACT CATCAGAAAC TAGACATGGG TGA | 700 |
>AT4G04404.1 longest ORF length:230
MSIKEPYFMT EIEDHEMNEA AMSLVMFSKQ VYDFDLTHGN DDDSMDLDQL | 50 |
KDCVESMLDF REMVSNSGME KSTTCSDVVA LRSKLQSKSS HRCQICGKSF | 100 |
ECYQALGGHR RLHRPIKGKL ARKREYYKDD NSLFDSSGPS RVEEKILDCV | 150 |
ELKQDFGELL PLNSKFQKRP VSSCSYRCKI CGKSFGCFQA LGALGGHQRL | 200 |
HRPIKGKLAR KRKYSEDDNT LVDSSETRHG | 250 |
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