fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G05100 ATMYB74 myb domain protein 74 (.1)

>AT4G05100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 403
HpaI GTT|AAC 523, 604
NcoI C|CATGG 49
NdeI CA|TATG 472
StyI C|C[AT][AT]GG 49


Click here to view TAIR data

>AT4G05100.1 length:975
ATGGGACGAT CACCATGTTG TGAGAAGAAG AATGGTCTCA AGAAAGGACC 
50
ATGGACTCCT GAGGAGGATC AAAAGCTCAT TGATTATATC AATATACATG 
100
GTTATGGAAA TTGGAGAACT CTTCCCAAGA ATGCTGGGTT ACAAAGATGT 
150
GGTAAGAGTT GTCGTCTCCG GTGGACCAAC TATCTCCGAC CAGATATTAA 
200
GCGTGGAAGA TTCTCTTTTG AAGAAGAAGA AACCATTATT CAACTTCACA 
250
GCATCATGGG AAACAAGTGG TCTGCGATTG CGGCTCGTTT GCCTGGAAGA 
300
ACAGACAACG AGATCAAAAA CTATTGGAAC ACTCACATCA GAAAAAGACT 
350
TCTAAAGATG GGAATCGACC CGGTTACACA CACTCCACGT CTTGATCTTC 
400
TCGATATCTC CTCCATTCTC AGCTCATCTA TCTACAACTC TTCGCATCAT 
450
CATCATCATC ATCATCAACA ACATATGAAC ATGTCGAGGC TCATGATGAG 
500
TGATGGTAAT CATCAACCAT TGGTTAACCC CGAGATACTC AAACTCGCAA 
550
CCTCTCTCTT TTCAAACCAA AACCACCCCA ACAACACACA CGAGAACAAC 
600
ACGGTTAACC AAACCGAAGT AAACCAATAC CAAACCGGTT ACAACATGCC 
650
TGGTAATGAA GAATTACAAT CTTGGTTCCC TATCATGGAT CAATTCACGA 
700
ATTTCCAAGA CCTCATGCCA ATGAAGACGA CGGTCCAAAA TTCATTGTCA 
750
TACGATGATG ATTGTTCGAA GTCCAATTTT GTATTAGAAC CTTATTACTC 
800
CGACTTTGCT TCAGTCTTGA CCACACCTTC TTCAAGCCCG ACTCCGTTAA 
850
ACTCAAGTTC CTCAACTTAC ATCAATAGTA GCACTTGCAG CACCGAGGAT 
900
GAAAAAGAGA GTTATTACAG TGATAATATC ACTAATTATT CGTTTGATGT 
950
TAATGGTTTT CTCCAATTCC AATAA
1000

>AT4G05100.1 longest ORF length:324
MGRSPCCEKK NGLKKGPWTP EEDQKLIDYI NIHGYGNWRT LPKNAGLQRC 
50
GKSCRLRWTN YLRPDIKRGR FSFEEEETII QLHSIMGNKW SAIAARLPGR 
100
TDNEIKNYWN THIRKRLLKM GIDPVTHTPR LDLLDISSIL SSSIYNSSHH 
150
HHHHHQQHMN MSRLMMSDGN HQPLVNPEIL KLATSLFSNQ NHPNNTHENN 
200
TVNQTEVNQY QTGYNMPGNE ELQSWFPIMD QFTNFQDLMP MKTTVQNSLS 
250
YDDDCSKSNF VLEPYYSDFA SVLTTPSSSP TPLNSSSSTY INSSTCSTED 
300
EKESYYSDNI TNYSFDVNGF LQFQ
350