fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G08250 GRAS family transcription factor (.1)

>AT4G08250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 661
NdeI CA|TATG 575
PstI CTGCA|G 788
StyI C|C[AT][AT]GG 701, 1062, 1186, 1286
XbaI T|CTAGA 361, 709, 1122


Click here to view TAIR data

>AT4G08250.1 length:1452
ATGAATTATC CTTACGAGGA CTTCTTGGAC CTCTTCTTCT CTACCCACAC 
50
TGACCCGCTT GCCACGGCTG CAAGCACCTC TTCGAATGGT TATAGCTTGA 
100
ATGATCTTGA CATTGATTGG GACTGTGACT TCCGTGATGT CATTGAATCC 
150
ATTATGGGTG ATGAAGGAGC CATGATGGAA CCGGAATCGG AAGCTGTTCC 
200
AATGCTTCAT GACCAGGAGG GACTTTGTAA CTCTGCGTCA ACGGGTTTGT 
250
CTGTGGCTGA TGGGGTTAGT TTTGGTGAGC CTAAGACTGA TGAATCAAAG 
300
GGCTTGAGGT TGGTTCACTT ACTTGTGGCT GCTGCTGATG CGTCAACTGG 
350
TGCGAACAAG TCTAGAGAGC TAACTCGGGT TATACTTGCA AGGCTTAAAG 
400
ATTTGGTTTC TCCTGGTGAC CGAACTAACA TGGAGAGGTT AGCTGCTCAC 
450
TTCACCAACG GACTTTCAAA GTTGCTCGAA CGAGATAGTG TTCTGTGTCC 
500
CCAACAACAT CGTGATGATG TCTATGATCA GGCGGATGTG ATCTCAGCGT 
550
TCGAACTGCT GCAAAACATG TCTCCATATG TCAACTTTGG TTACCTCACT 
600
GCCACACAGG CTATTCTTGA AGCTGTGAAG TATGAACGTC GAATCCATAT 
650
AGTGGATTAC GATATCAATG AAGGCGTTCA GTGGGCTTCA TTGATGCAAG 
700
CCTTGGTGTC TAGAAATACA GGCCCGTCAG CCCAACATCT TAGAATCACG 
750
GCTTTGTCAC GAGCAACAAA CGGTAAAAAA TCCGTGGCTG CAGTCCAAGA 
800
GACTGGGCGG CGTCTAACTG CGTTTGCCGA TTCTATCGGC CAGCCATTTT 
850
CATATCAACA CTGTAAACTT GACACCAATG CATTCAGCAC ATCATCTTTG 
900
AAACTTGTAA GAGGAGAAGC AGTGGTAATC AATTGTATGT TGCATCTTCC 
950
TCGGTTTAGT CACCAAACAC CCAGTTCAGT CATTTCCTTT TTGTCGGAAG 
1000
CTAAAACTCT AAACCCGAAA CTTGTTACGC TTGTTCACGA AGAAGTTGGT 
1050
CTGATGGGAA ACCAAGGTTT TCTATATCGT TTTATGGACT TGCTACATCA 
1100
GTTCTCAGCC ATATTCGACT CTCTAGAGGC AGGCCTTTCA ATCGCTAACC 
1150
CGGCCCGTGG CTTTGTTGAG CGTGTTTTTA TCGGTCCTTG GGTTGCTAAT 
1200
TGGTTGACGC GTATCACCGC TAATGATGCA GAAGTCGAGA GCTTTGCTTC 
1250
GTGGCCACAG TGGTTAGAGA CTAATGGGTT CAAACCCTTG GAAGTGAGCT 
1300
TTACCAACCG TTGTCAAGCA AAACTCCTTT TGAGTTTGTT TAATGATGGA 
1350
TTTAGAGTGG AAGAATTGGG CCAAAACGGG CTCGTTTTGG GATGGAAATC 
1400
TCGGCGTCTT GTGTCGGCCT CCTTTTGGGC CTCGTGCCAG ACGAATCAGT 
1450
AA
1500

>AT4G08250.1 longest ORF length:483
MNYPYEDFLD LFFSTHTDPL ATAASTSSNG YSLNDLDIDW DCDFRDVIES 
50
IMGDEGAMME PESEAVPMLH DQEGLCNSAS TGLSVADGVS FGEPKTDESK 
100
GLRLVHLLVA AADASTGANK SRELTRVILA RLKDLVSPGD RTNMERLAAH 
150
FTNGLSKLLE RDSVLCPQQH RDDVYDQADV ISAFELLQNM SPYVNFGYLT 
200
ATQAILEAVK YERRIHIVDY DINEGVQWAS LMQALVSRNT GPSAQHLRIT 
250
ALSRATNGKK SVAAVQETGR RLTAFADSIG QPFSYQHCKL DTNAFSTSSL 
300
KLVRGEAVVI NCMLHLPRFS HQTPSSVISF LSEAKTLNPK LVTLVHEEVG 
350
LMGNQGFLYR FMDLLHQFSA IFDSLEAGLS IANPARGFVE RVFIGPWVAN 
400
WLTRITANDA EVESFASWPQ WLETNGFKPL EVSFTNRCQA KLLLSLFNDG 
450
FRVEELGQNG LVLGWKSRRL VSASFWASCQ TNQ
500