fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G09180 bHLH081 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G09180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 92
HindIII A|AGCTT 122, 333
HpaI GTT|AAC 738
PstI CTGCA|G 677
XbaI T|CTAGA 403


Click here to view TAIR data

>AT4G09180.1 length:789
ATGCAACCAA CATCCGTCGG TAGTAGCGGC GGTGGTGACG ACGGAGGAGG 
50
CAGAGGAGGA GGAGGAGGGC TAAGTAGAAG TGGACTATCT CGGATCCGTT 
100
CAGCTCCAGC GACTTGGCTT GAAGCTTTAC TTGAGGAAGA TGAAGAAGAG 
150
TCTTTGAAAC CTAATCTTGG TCTCACCGAT TTGCTTACCG GGAACTCGAA 
200
CGATTTACCG ACAAGTCGCG GCTCGTTCGA GTTCCCGATT CCTGTTGAGC 
250
AAGGGTTGTA TCAACAAGGT GGGTTTCACC GACAGAATAG TACTCCGGCG 
300
GATTTTCTTA GTGGTTCTGA TGGATTTATC CAAAGCTTTG GGATTCAGGC 
350
GAATTACGAT TACTTATCGG GGAATATCGA TGTTTCTCCG GGAAGTAAGC 
400
GGTCTAGAGA AATGGAAGCA CTCTTCTCTT CTCCTGAGTT TACTTCTCAA 
450
ATGAAAGGAG AGCAAAGCAG CGGTCAAGTT CCTACCGGAG TATCAAGCAT 
500
GTCGGATATG AACATGGAGA ACCTTATGGA GGACTCTGTT GCTTTTAGGG 
550
TTCGGGCTAA ACGTGGTTGC GCAACTCATC CCCGCAGCAT TGCCGAGAGG 
600
GTACGAAGGA CGCGGATTAG TGATCGGATA AGGAAGCTAC AAGAGCTTGT 
650
ACCTAACATG GACAAGCAAA CCAACACTGC AGACATGTTA GAAGAAGCAG 
700
TAGAATACGT GAAAGTTCTT CAAAGGCAGA TCCAGGAGTT AACAGAAGAA 
750
CAGAAGAGGT GCACATGCAT ACCTAAGGAA GAACAATAA
800

>AT4G09180.1 longest ORF length:262
MQPTSVGSSG GGDDGGGRGG GGGLSRSGLS RIRSAPATWL EALLEEDEEE 
50
SLKPNLGLTD LLTGNSNDLP TSRGSFEFPI PVEQGLYQQG GFHRQNSTPA 
100
DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ 
150
MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER 
200
VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE 
250
QKRCTCIPKE EQ
300