Locus |
Common name |
Short description |
AT4G09180 |
bHLH081 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT4G09180.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
92 |
HindIII
| A|AGCTT |
122, 333 |
HpaI
| GTT|AAC |
738 |
PstI
| CTGCA|G |
677 |
XbaI
| T|CTAGA |
403 |
Click here to view TAIR data
>AT4G09180.1 length:789
ATGCAACCAA CATCCGTCGG TAGTAGCGGC GGTGGTGACG ACGGAGGAGG | 50 |
CAGAGGAGGA GGAGGAGGGC TAAGTAGAAG TGGACTATCT CGGATCCGTT | 100 |
CAGCTCCAGC GACTTGGCTT GAAGCTTTAC TTGAGGAAGA TGAAGAAGAG | 150 |
TCTTTGAAAC CTAATCTTGG TCTCACCGAT TTGCTTACCG GGAACTCGAA | 200 |
CGATTTACCG ACAAGTCGCG GCTCGTTCGA GTTCCCGATT CCTGTTGAGC | 250 |
AAGGGTTGTA TCAACAAGGT GGGTTTCACC GACAGAATAG TACTCCGGCG | 300 |
GATTTTCTTA GTGGTTCTGA TGGATTTATC CAAAGCTTTG GGATTCAGGC | 350 |
GAATTACGAT TACTTATCGG GGAATATCGA TGTTTCTCCG GGAAGTAAGC | 400 |
GGTCTAGAGA AATGGAAGCA CTCTTCTCTT CTCCTGAGTT TACTTCTCAA | 450 |
ATGAAAGGAG AGCAAAGCAG CGGTCAAGTT CCTACCGGAG TATCAAGCAT | 500 |
GTCGGATATG AACATGGAGA ACCTTATGGA GGACTCTGTT GCTTTTAGGG | 550 |
TTCGGGCTAA ACGTGGTTGC GCAACTCATC CCCGCAGCAT TGCCGAGAGG | 600 |
GTACGAAGGA CGCGGATTAG TGATCGGATA AGGAAGCTAC AAGAGCTTGT | 650 |
ACCTAACATG GACAAGCAAA CCAACACTGC AGACATGTTA GAAGAAGCAG | 700 |
TAGAATACGT GAAAGTTCTT CAAAGGCAGA TCCAGGAGTT AACAGAAGAA | 750 |
CAGAAGAGGT GCACATGCAT ACCTAAGGAA GAACAATAA | 800 |
>AT4G09180.1 longest ORF length:262
MQPTSVGSSG GGDDGGGRGG GGGLSRSGLS RIRSAPATWL EALLEEDEEE | 50 |
SLKPNLGLTD LLTGNSNDLP TSRGSFEFPI PVEQGLYQQG GFHRQNSTPA | 100 |
DFLSGSDGFI QSFGIQANYD YLSGNIDVSP GSKRSREMEA LFSSPEFTSQ | 150 |
MKGEQSSGQV PTGVSSMSDM NMENLMEDSV AFRVRAKRGC ATHPRSIAER | 200 |
VRRTRISDRI RKLQELVPNM DKQTNTADML EEAVEYVKVL QRQIQELTEE | 250 |
QKRCTCIPKE EQ | 300 |
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