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| Locus | Common name | Short description |
| AT4G09820 | BHLH42, TT8, bHLH042 | TRANSPARENT TESTA 8, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT4G09820.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1080 |
| NdeI | CA|TATG | 811 |
| SacI | GAGCT|C | 583 |
| StyI | C|C[AT][AT]GG | 1191 |
| XbaI | T|CTAGA | 466 |
Click here to view TAIR data
>AT4G09820.1 length:1557
ATGGATGAAT CAAGTATTAT TCCGGCAGAG AAAGTGGCCG GAGCTGAGAA | 50 |
AAAAGAGCTT CAAGGGCTGC TTAAGACGGC GGTTCAATCT GTGGACTGGA | 100 |
CTTATAGTGT CTTCTGGCAA TTTTGTCCTC AACAACGGGT CTTGGTGTGG | 150 |
GGGAATGGAT ACTACAACGG TGCAATAAAG ACGAGGAAGA CAACTCAACC | 200 |
AGCGGAGGTG ACGGCAGAAG AGGCGGCGTT AGAGAGGAGC CAACAGCTCA | 250 |
GGGAGCTTTA TGAGACACTT TTAGCCGGAG AGTCAACGTC AGAAGCAAGA | 300 |
GCATGCACCG CATTGTCACC GGAGGATTTG ACGGAGACAG AATGGTTTTA | 350 |
TCTAATGTGC GTCTCTTTCT CTTTTCCTCC TCCATCTGGG ATGCCAGGAA | 400 |
AAGCGTATGC AAGGAGGAAG CACGTATGGC TAAGTGGTGC AAATGAAGTT | 450 |
GACAGTAAAA CTTTTTCTAG AGCTATTCTC GCTAAGAGTG CTAAAATTCA | 500 |
GACAGTGGTT TGCATTCCAA TGCTTGATGG TGTTGTGGAA CTAGGCACAA | 550 |
CGAAAAAGGT AAGAGAAGAT GTAGAGTTTG TTGAGCTCAC AAAGAGTTTC | 600 |
TTCTATGACC ACTGCAAGAC GAACCCAAAG CCGGCTCTTT CTGAACACTC | 650 |
CACCTACGAA GTGCATGAAG AAGCCGAAGA CGAAGAAGAA GTAGAAGAAG | 700 |
AGATGACAAT GTCAGAGGAA ATGAGGCTTG GCTCTCCTGA TGATGAAGAT | 750 |
GTTTCCAATC AAAATCTACA CTCTGATCTT CATATTGAAT CAACCCATAC | 800 |
GTTAGACACA CATATGGACA TGATGAATCT AATGGAGGAA GGTGGAAACT | 850 |
ATTCTCAGAC AGTAACAACA CTTCTCATGT CACACCCCAC AAGTCTTCTT | 900 |
TCAGATTCAG TTTCCACATC TTCTTACATC CAATCATCGT TTGCCACGTG | 950 |
GAGGGTTGAG AATGGCAAAG AGCATCAGCA AGTGAAAACG GCGCCGTCGT | 1000 |
CACAATGGGT GCTCAAACAA ATGATCTTCA GAGTTCCTTT CCTCCATGAC | 1050 |
AACACTAAAG ATAAGAGGCT ACCGCGGGAA GATCTGAGCC ACGTAGTAGC | 1100 |
AGAGCGACGC AGGAGGGAGA AGCTGAACGA GAAATTCATA ACGTTGAGAT | 1150 |
CAATGGTTCC ATTTGTGACC AAGATGGATA AAGTCTCAAT CCTTGGAGAC | 1200 |
ACCATTGCGT ACGTAAATCA TCTTCGAAAG AGGGTCCATG AGCTTGAGAA | 1250 |
TACTCATCAT GAGCAACAGC ATAAGCGGAC GCGTACTTGT AAGAGAAAAA | 1300 |
CATCGGAGGA GGTGGAGGTT TCCATCATAG AGAATGATGT TTTGTTAGAG | 1350 |
ATGAGATGTG AGTACCGAGA TGGTTTGTTG CTTGACATTC TTCAGGTTCT | 1400 |
TCATGAGCTT GGTATAGAGA CTACGGCAGT TCATACCTCG GTGAACGACC | 1450 |
ATGATTTCGA GGCGGAGATA AGGGCGAAAG TAAGAGGGAA GAAAGCAAGC | 1500 |
ATCGCTGAGG TCAAAAGAGC CATCCACCAA GTCATAATAC ATGATACTAA | 1550 |
TCTATAG | 1600 |
>AT4G09820.1 longest ORF length:518
MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW | 50 |
GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR | 100 |
ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV | 150 |
DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF | 200 |
FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED | 250 |
VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL | 300 |
SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD | 350 |
NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD | 400 |
TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE | 450 |
MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS | 500 |
IAEVKRAIHQ VIIHDTNL | 550 |